Sphingomonas koreensis: BRX40_14645
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Entry
BRX40_14645 CDS
T04828
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03420
Nucleotide excision repair
skr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRX40_14645
03430 Mismatch repair
BRX40_14645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_14645
Enzymes [BR:
skr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRX40_14645
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRX40_14645
MMR (mismatch excision repair)
Other MMR factors
BRX40_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APR53501
UniProt:
A0A1L6JC31
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All DBs
Position
3005896..3008232
Genome browser
AA seq
778 aa
AA seq
DB search
MSVPVASPDDPPYLRGLNAPQREAVLTLDGPVLVLAGAGTGKTAALTARLAHLLWTRRAY
PSEILSVTFTNKAAREMRERVRGLVGDAVEGMPWLGTFHAIGAKMLRRHAELVGLQNNFT
ILDTDDQLRLIKQLIAANDLDEKRWPARQLAGLIDGWKNKGLTPKDLDAGESELFANGRG
QSLYAQYQDRLRTLNACDFGDLLLHMLTILKTHRDVLQHYQQRFRYIMVDEYQDTNSVQY
LWLRLLAQERKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPHIL
AAASGVIANNGGRLGKELWTEKDAGEKVRVVGVWDGPEEARRVGEEIENTQRREGKSLDE
FAILVRAQHQTREFEDRFIATGLPYRIVGGFRFYERAEIRDALAYLRLVHQGADDLAFER
IVNVPKRGLGDKAIAKIHQLARAEGIPLLLAAARILDTDELTPQARRALGNFVGDIARWK
DMYSSASPEEGAVVEATDTRIGGLPHTELAQIILDESGYTAMWQADRTAEAAGRLENLSE
LVRAMEEYETLGAFLEHVSLVMDNDGNADEPKVTIMTIHAAKGLEFDTVFLAGWEEGIFP
SQRALDEGGLASLEEERRLAYVAITRARRLATILHAANRRIYGQWTSSIPSRFVGELPKD
HIDEESTMSGGASLWRANWSEHADPFAHVGRGTGRGPGWQRAAAPSSTFTTAPKRVVESR
ASAVSLGNKGRDDLSLGMRVFHQKFGYGEIVEIEGNKLEIEFEQAGRKRVMDSFVSVG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacccgtagcctctcccgacgatcccccctatctgcgcggcctcaacgcgccc
cagcgcgaagccgtgctcacgctcgacggccccgtcctcgtcctcgccggcgccggcacg
ggcaagaccgccgcgctcaccgcgcgtcttgcccatctcctctggacccgccgcgcctat
ccgtcggagatcctcagcgtcaccttcaccaacaaggccgcgcgtgagatgcgggagcgc
gtccgcggccttgtcggcgacgcggtggaggggatgccctggctcggcaccttccacgcg
atcggcgccaagatgctgcgccgccatgccgagctggtcgggctgcagaacaacttcacc
atcctcgacaccgacgatcagctgcgcctcatcaagcagctcatcgccgccaacgatctg
gacgaaaagcgctggcccgcgcgccagctcgccgggttgatcgacgggtggaagaacaag
ggcctgacgccgaaggatctcgacgccggcgagtcggaactgtttgccaatggccgcggc
cagtcgctctacgcccagtatcaggatcgcctgcgcaccctcaacgcctgcgacttcggc
gatctgctgctccacatgctgacgatcctcaagacccaccgcgacgtgctgcagcactac
cagcagcgcttccgctacatcatggtcgacgagtatcaggacaccaacagcgtccagtat
ctctggctccgcctgctcgcgcaggagcgcaagaacatctgctgcgtcggcgacgacgat
cagtcgatctattcgtggcgcggcgcccaggtcgagaatatcctgaagttcgagaaggat
ttccccggcgcgaaggtgatccggctcgaacagaactaccgctccaccccccacatcctc
gccgccgccagcggcgtcatcgccaacaatggcggccgcctcggcaaggagctgtggacc
gagaaggacgcgggcgagaaggtccgcgtcgtcggcgtctgggacgggcctgaggaagcc
cgccgcgtcggcgaagagatcgaaaatacccagcgccgcgagggcaagtcgctcgacgaa
ttcgccatcctcgtccgcgcccagcaccagacgcgcgagttcgaggaccgcttcatcgcc
accggcctgccctatcgcatcgtcggcggcttccgcttctacgagcgtgccgagatccgc
gacgcgctcgcctatctccgcctcgtccatcagggcgccgacgacctcgccttcgaacgc
atcgtcaacgtccccaagcgcggcctgggcgacaaggcgatcgccaagatccatcagctc
gcccgggccgagggcatccccctgctcctcgccgccgcgcgcatcctcgacaccgacgag
ctgacgccgcaggcccgccgcgcgctcggtaatttcgtcggcgacatcgcccgctggaaa
gacatgtactcgagcgcctctcccgaagagggagccgtcgtcgaggcaaccgacacccgc
atcggcggcctcccccataccgagctcgcccagatcatcctcgacgagagcggctatacc
gccatgtggcaggccgaccgcactgccgaggctgcgggccggctcgagaacctgtccgaa
ctcgtccgcgcgatggaggaatacgaaaccctcggcgcgttcctcgaacacgtctccctc
gtcatggacaatgacggcaacgccgacgagcccaaggtcacgatcatgaccatccacgcc
gccaaggggctggagttcgacaccgtgttcctcgcggggtgggaggaaggcatcttcccc
agccagcgcgccctcgacgaaggcggcctcgcctcactggaggaggaacgccgcctcgcc
tacgtcgcgatcacccgcgcccgccgcctcgcgacgatcctgcacgccgccaaccgccgc
atctacggccagtggaccagctccatccccagccgcttcgtcggcgagctgcccaaggac
catatcgacgaggaatcgaccatgtccggcggtgcctccctgtggcgcgccaactggagc
gagcacgccgaccccttcgcccatgtcggccgcggcactggccggggccccggctggcaa
cgcgccgccgcgccgagctcgaccttcaccacagcgccgaaacgcgtggtcgaaagccgc
gccagcgcggtgagcctaggcaacaagggccgcgacgacctgtcgctcggcatgcgcgtc
ttccaccagaagttcggctatggcgaaatcgtcgagatcgaaggcaacaagctcgagatc
gagtttgagcaagctgggcggaagcgggttatggatagttttgtgtcggtggggtga
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