Sphingomonas koreensis: BRX40_15410
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Entry
BRX40_15410 CDS
T04828
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00300
Lysine biosynthesis
skr00470
D-Amino acid metabolism
skr01100
Metabolic pathways
skr01110
Biosynthesis of secondary metabolites
skr01120
Microbial metabolism in diverse environments
skr01230
Biosynthesis of amino acids
Module
skr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRX40_15410
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRX40_15410
Enzymes [BR:
skr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BRX40_15410
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
APR53624
UniProt:
A0A1L6JCJ6
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Position
complement(3158527..3159747)
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AA seq
406 aa
AA seq
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MKPIGPIPPYFMRQGELTIAGRAAADWVAEAGSPLFVYDMGIVHERLRGLRAALPDACEI
HFAIKANPLPEFIAAVAPLVGGLDVASGGELAKALKVKDAAHISFAGPGKRDAELEAAIV
AGATLNLESEGEAERALTIGRVLGTTPRLAVRVNPDFELRGSGMKMGGRASPFGVDAARV
PALVNRLIAAGADWRGFHIFAGSQSLDTAAIIETQAATVALAARLAQEAGVSPPLVNLGG
GFGIPYFSGDMPIDIDAVGTALGKTLESRQEILAQSGFAIELGRWIAGECGVYLMRVIDR
KISGDETFLICDGGLHHQLAASGNFGTVVRRNYPVAVAGKMDAEPVETVSVVGPLCTPLD
RLADRVALPRSEPGDVIAIFLAGAYGASASPAAFLGHGPAAEIVAG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatcgggccgattcctccctatttcatgaggcagggcgaattgacgatcgcg
gggagagccgcggcggactgggtggcggaggcagggtcgccgctgttcgtctacgacatg
gggatcgtgcatgaacgactgagggggctacgtgcggcgcttcccgatgcatgtgagatc
cacttcgcgatcaaggccaaccccttgcccgaattcatagcggcagtggcgccgctcgtt
ggtgggctggatgtcgcgtcgggcggggaactggccaaggcgctcaaggtcaaagacgcg
gcgcacatcagctttgcgggaccgggcaaacgcgatgccgaactggaagcggcgatcgtg
gcgggcgcaacgctcaacctcgaatccgaaggggaggcggagcgggcactgacgatcggg
cgagtgctgggtacgacgccaaggctggcggtgcgggtcaatccggatttcgagctgcgc
ggatcgggcatgaagatgggcgggcgcgcctcgccatttggggtcgatgccgcacgcgtg
ccggcgttggtgaaccggctgatcgcggcgggcgcagactggcgagggttccatatcttc
gccgggtcgcagtcgctcgataccgcggcgatcatcgagacgcaggcggcgacggtagca
ctggccgcgcggctggcacaggaagccggcgtgtcgccgccgctggtgaacctgggcggc
gggttcggaatcccctatttttcaggcgatatgccaatcgatatcgatgcggtgggaacc
gcgttgggcaagacattggagtctcggcaggaaatcctcgcgcaatcgggtttcgcgatc
gagcttgggcgctggatagcaggcgagtgcggcgtctatctgatgcgcgtgatcgaccgg
aagatcagcggggacgagaccttcctgatctgtgacggcgggctgcatcaccaactcgcc
gcatcgggtaatttcggcacggtggtacgacgcaactatccggtcgccgtggcgggaaag
atggatgctgagccggtcgagaccgtctccgtcgtagggccgctgtgcacgcccctggac
cggctcgccgaccgggtggcgctgccgcgctcggagccgggcgatgtcattgcgatattc
ctggcgggcgcctatggcgcgagcgcaagccccgcggcgtttctgggacatggcccggcc
gcggagatcgtcgctggttga
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