Sphingomonas koreensis: BRX40_15465
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Entry
BRX40_15465 CDS
T04828
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRX40_15465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skr03021
]
BRX40_15465
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_15465
Enzymes [BR:
skr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRX40_15465
Transcription machinery [BR:
skr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRX40_15465
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRX40_15465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Phage_tube_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
APR53633
UniProt:
A0A1L6JCL0
LinkDB
All DBs
Position
complement(3170434..3171495)
Genome browser
AA seq
353 aa
AA seq
DB search
MSVNAKNWQELKKPNGLEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDLVLNVKQIALKMQGEGAKRLQLSATGPAEVKAGDIA
VSGDIEVMNPDLVLCHLDDGATLNMELVADTGKGYVPAASNRPADAPIGLIPVDALYSPV
RQVSYKVENTRVGQELDYDKLSLSVETDGTVTPEDAVAYAARILQDQLALFVHFDDSAIT
RSAPIGVAAPAAAEGGAGDTATINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaacgcaaagaactggcaggaactgaagaagccgaacggccttgagaaaaag
ggcggtgacggcaagcggaaggcgaccttcgtcgctgaaccgctggagcgtggcttcggc
ctgacgctcggcaacgcgctgcgccgcgtgctgctctcgtcgctccagggtgcggcggtg
acctcgatcaagatcgagaacgtgctccacgaattctcgtcgctcgccggcgtgcgtgag
gacgtgaccgatctcgtgctcaacgtgaagcagatcgcgctcaagatgcagggcgaaggc
gccaagcgtctccagctcagcgcgaccggcccggccgaagtcaaggccggcgacatcgcg
gtttcgggcgacatcgaagtgatgaaccccgatctggtgctgtgccacctcgacgatggc
gcaacgctgaacatggaactcgtcgccgacaccggcaagggctatgtcccggccgcgtcg
aaccgtccggccgacgcgccgatcggtctgatcccggtcgacgcgctctactcgccggtc
cgtcaggtcagctacaaggtcgagaacacccgcgtcgggcaggaactcgattacgacaag
ctcagcctctcggtcgagaccgacggcaccgtgacccctgaagacgccgtggcctatgcc
gcgcgcattcttcaggaccagctcgcgctgttcgtccacttcgacgattcggcgatcacc
cgttcggcaccgatcggcgtggccgctccggccgcggcggaaggcggcgcgggcgacacc
gcgacgatcaaccgctacctgctcaagaaggtggacgagctcgagctgtcggtccgttcg
gccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagaccgaa
gccgagatgctgcgcaccccgaacttcggccgcaagtccttgaacgagatcaaggaagtg
ctgtcgtcgatgggtctgcgcctcggcatggaaatcccgggctggccgcctgagaatatc
gaagagatggccaagaagctcgaacaggagatcatggggtaa
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