Sphingomonas koreensis: BRX40_16300
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Entry
BRX40_16300 CDS
T04828
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_16300
Enzymes [BR:
skr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRX40_16300
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRX40_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
APR53770
UniProt:
A0A1L6JE42
LinkDB
All DBs
Position
complement(3368945..3371890)
Genome browser
AA seq
981 aa
AA seq
DB search
MGEGRGLHLYSIPPHRAFADALAQGLIRRFGGDPLRLARGIVLVPTNRAKKAVTDAFVRA
SGGGLLLPRLVAVGDPELDEAAGPFLDPADDDDPIPPAVDPLQRRLILARLVQAGQPGID
AAEAVRLAGDLGRTLDQLLVEEIDPRRMRDVAAGELSEHWQRSLDLFEIVLSKWPQELEK
LGRIDLAERRNQLLDRVSARWRGDPPDRFVCAAGITTSAPAIARLLRVVAGLPGGMVVFP
GIDLAMGDAEWAMLGPFEADPVTGRRRRSLETHPQFHLKLLIDRMGVQRGEIEPWRVATE
LDAPPARSKAIASAMMPAELTRGWSDLPAAERRLAEVRALEIATPAEEAQAIALALREVL
ETEGRTAALVTPDRALAKRVAAHCARWGLAIDDSAGAALASQPPGTLLLALAEAGAQAFA
PMALLALLKHPLVAAGDGRLGWLDGARALDLALRGPRPAAGLAGVEAHLADGEGYDAHIR
RSALGWWREVEPLLAPLEALYAGGAAPLTGLLAQLRETATALCGDGLWARADGRAAAALL
DDLEREASHGPALVEPESLAAMLRTLMDEIAVRPPQGGHPRLAIYGLIEARLQTADLLVL
GGLNEGVWPGLPAPDPWLAPRIRSELGLPGLERRIGLSAHDLAMGLGAREVLLTRARRDA
GAPTIASRFWLRLEALSGGLDRAEELEAWARAVDDPGAYEPASRPEPCPPAAIRPRVIPV
TDVDRLKADPYAFYAKRMLRLRQLDPVDADPSAAWRGTAVHDVLEKWAKLDACDPEALEP
RVLAMLAQAHPMMRALWQPRLIEAVRWIVREIEARPQRRVVAVEQEGAIDFAGVTLKGKF
DRIDAMGDGTLGVVDYKTGQPPSTKAVRAGYSLQLGLLGLIAERGGFQGISGRASAFEYW
SLARKGGEFGYVQSPVDAAGKYGKMLPDEFVPTAAENFTETARAYLTGDVPFTAKLHPEY
APYADYDQLMRRDEWYGRERR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagggccgcggcctccacctctattccatcccgccgcaccgggcctttgccgac
gcgctcgcccaggggttgatccgccgcttcggcggcgatccgctgcggctggcgcggggg
atcgtgctggtgccgaccaatcgcgcgaagaaggccgtcaccgacgcgttcgtccgtgcg
agcgggggcgggctgctgctgccgcgattggtcgcggtgggcgacccggagctggacgag
gcggcggggccgtttctcgacccggcggatgatgacgatcccataccgccagcggtcgat
ccgcttcagcggcggttgatcctcgcccggctggttcaggcaggacagccggggatcgat
gcggcggaggcggtgcggctggccggcgatctcggccgcacgctcgatcagctgctggtc
gaggagatcgacccgcgacggatgcgtgacgtggcggcgggcgaactgtccgaacattgg
cagcgatcgctcgacctgttcgaaatcgtcctgagcaaatggccgcaagagcttgagaag
cttggccggatcgatctggccgagcggcgcaaccagttgctcgatcgcgtgtcggcgcgg
tggcggggtgatccgcccgaccggttcgtctgcgctgcgggcatcacgacttccgccccc
gcgatcgcacggctgttgcgcgtcgtcgcgggcctccccggaggcatggtcgtgttccct
ggcatcgacctggcgatgggggatgcggaatgggcgatgctggggccgttcgaagcggat
ccggttaccggaaggcgtaggcgttcgctggagacccatccgcaattccacctgaagctg
ctgatcgaccggatgggcgtgcagcgcggcgagatcgagccctggcgcgtcgcgaccgag
ctcgacgcgccgccagcgcgcagcaaggcgatcgcgagcgcgatgatgcccgccgagctg
accaggggctggagcgacctgccggccgccgaacgtcggcttgcggaggtccgcgcgctt
gaaatcgcaactccggccgaggaggcgcaggcgatcgccctggcactgcgcgaggtgctg
gagaccgaggggcgcaccgcagcgctggtgacgcccgaccgagcgctggcgaagcgagtc
gccgcgcattgcgcgcgctgggggctggcgatcgacgattcggcgggtgctgcacttgcc
agccagccgccgggtaccttgctgctcgcgctcgccgaggccggcgcgcaggccttcgcg
ccgatggcgctgctagcattgctcaagcatccgctggtcgctgcgggcgatggacggctt
ggatggctggacggggcgagggcgctcgacctcgccctgcgcggcccgcgcccggcggcg
ggactggccggggtcgaggcgcacctcgcggacggcgagggctatgacgcgcacatccgg
cgttcggcgctgggctggtggcgtgaagtcgagccgctgctcgcgccgctcgaagcgctc
tatgcgggcggtgcagcgcccttgaccggtttgctggcgcagttgcgtgagaccgcgacg
gcgttgtgcggggatgggctgtgggcccgtgccgacgggcgtgccgcggcggcactgctc
gatgatctggagcgcgaggcgtcgcatggcccggcgctggtcgagcccgagagtcttgcg
gcgatgctgcgcacgttgatggacgagatcgcggtgcgtccgccgcagggcgggcatccg
cggcttgccatctatggtctgatcgaagcgcggttgcagaccgcggatctgctggtgctg
ggcgggctcaacgagggggtgtggccggggctgcctgcgcccgatccctggctcgcgcca
cgcatccggtccgagctggggctgccggggctggagcggcggatcgggctttcggcgcac
gatctggccatgggccttggcgcgcgcgaggtgctgctgacgcgcgcgaggcgcgatgcc
ggtgcgccgaccatcgcctcgcgcttctggctgcggcttgaggcgctgtcgggcgggctg
gaccgcgcggaagaactggaggcgtgggcgcgggcagttgacgatccgggggcatatgag
cccgcgtcgcggcccgaaccgtgcccgcccgccgctattcgtcctcgcgtgatcccggtg
accgatgtcgaccggctcaaggccgatccctacgctttctacgccaagcgcatgctgcgg
ttgcgtcagctagacccagtcgatgccgatcccagcgcggcgtggcgcgggacggcggtg
cacgatgtgctggagaaatgggcgaagctcgacgcgtgcgaccccgaggcgctcgagcca
cgcgtactggccatgctcgctcaggcgcacccgatgatgcgcgcgctgtggcagccgcgt
ctgatcgaggcggtacgctggatcgtgcgcgagatcgaggcgcggccgcaacgccgggtg
gtggcggtggagcaggagggcgcgatcgactttgccggggtgacgctcaagggcaagttc
gaccggatcgatgcgatgggcgacggcacgctgggggtggtggactataagaccggccag
ccgccgagcaccaaggcggtgcgcgcgggctacagcctgcaattgggcctgctcgggctg
atcgccgaacgaggcgggttccaggggatatccggccgcgcgagcgccttcgaatattgg
tcgctcgcgcgcaagggcggcgaattcggctacgtccagtcgccggtcgacgccgcgggc
aaatacggcaagatgctgcccgatgagttcgtgccgaccgccgccgagaacttcaccgag
accgcgcgcgcctatctgaccggcgatgtgccgttcaccgccaagcttcaccccgaatac
gccccctatgcggactatgatcagttgatgcgccgcgacgaatggtatggccgtgagcgg
cgctag
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