Sphingomonas koreensis: BRX40_17410
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Entry
BRX40_17410 CDS
T04828
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skr02000
]
BRX40_17410
Transporters [BR:
skr02000
]
Other transporters
Pores ion channels [TC:
1
]
BRX40_17410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD
Motif
Other DBs
NCBI-ProteinID:
APR53948
UniProt:
A0A1L6JDI5
LinkDB
All DBs
Position
complement(3625590..3629141)
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AA seq
1183 aa
AA seq
DB search
MTSPADIISSIYYVSPYATLPPGRGTAGLTVNVKQSSVPTTPPNLVLVIRLRLANDPMVI
GVSATSGAGTSPIYALYQPSFPLSATTSYLVDLIWVPQGTSPDGIDWSEAVATAPVTAAL
VTVTSASFDGQNVTALLDYGQSSFQIGAQLLVYGYSGGVWAFAGSANVEGSTATVGVSGY
PAPYRIYATALIPAVNPGGAGSFAAPFSQGPFSPPQTVPQAASSLIQADYDGAAVSLVWG
LDGVQGAPIPQGSRVAVQVSGAEIAGFDGGPTSAGFGVATDAASGVTAVVQTQALAIGAA
PLSIPLITSAPTVSNVAINGAAVEASVTTSAAASEGWLLRGDDVVAGPVAAASGKLTFTY
AASGAVGLTVVARGKSSDGKTTGPRSAPATLLATAPAPVAVTIQTDPSNSANWQVACHWA
PLPDSPSSVASYTVSVMQSGSATPLATATTSGVAAVLSFAKTAITAGATQTLSLLATGVS
GGTSPAAAQPLAFVTPTLATVTASADQLAVAWTAPTGLPAGPDAAYAIRVINGAGAGANQ
TLLVGAPTGGTAAAVPLAGLSVPAGGSAVAMVDLLLGPVRVIADRSMAAGQQATAILAAP
RIAAAATNPATGLATLNWADAGTGISYALQFSDGTSQSSSTTSYTLTSAAGVDAGLRYQV
ASTQTANGVIVTGPYSAAVAVPTAADTLAAARYDGIAVTASWEAHGSADAHILSIYDNAT
TATAAASVTVNGTAGSLAFAADPAKTYSVYVQPVTAEGVGLSANAIPLFAPAFFLSQQPA
ASATPYAYPATAQANLGSDAANPPAEAITLYLPQLGLTTDALGPNPIVSGPFTVAASGDA
DLPYKLTIAADTAVWSFDTTSVRPALQTDYVQLLTSLEAPGTGLAGASPYGIYLVQNAIG
RMMPQTFDEQLYYNYGLSLSTSAGSAYVDLRPGMVLRVVLSDYVSINEQSLPTWLNGYAG
ATVFDFEVGSYHTNGAWRVGFDGFLNQLASHNALQVPAPFKSTTGMGQSGVAAAADLYYP
QFQQPYFRAFVPATLLSPSSTTNANQTNLNFAIVAAASFTAINGATPNPQQYATAYFRGR
STLEAMIRVRVDGGERLVPVGTSLGNLLEQLQRRPNAAGRSGGLRLLRASGPGQTATSAA
GSLAAQLEVMLDWQGGVVYTAGSGLDGYSLPLLAGDQILTAGF
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcccggccgacatcatctccagcatctactatgtcagcccctatgcgaccctg
ccgccagggcgcgggaccgccggcctgacggtcaacgtcaagcagtcgagcgtgcccacg
acaccacccaatcttgtgctggtgatccggttgcggcttgcgaacgatccgatggtgatc
ggcgtgtcggctacgtcgggcgcgggcacgtcgccgatctacgcactctaccagccctcc
tttccgctttccgcgaccaccagctacctcgtggatctcatctgggtgccgcagggtacg
tcgcccgacggcatcgactggagcgaggcggttgccaccgcgccggtcacggccgccctg
gtcaccgtgacgagcgccagcttcgacgggcagaacgtcaccgcgttgctcgactatggc
caaagcagcttccagatcggggcacagttgctggtctatggctattcgggcggcgtctgg
gcgtttgcgggcagcgcgaatgtcgagggcagtaccgcaacggtcggggtgtccggctat
ccggcgccctatcgcatctatgcgaccgcactgatcccggcggtgaaccccggcggcgcc
ggcagctttgccgcgccgttcagccaggggccgttcagcccgccgcagaccgtcccgcag
gccgcatcttcgctgatccaggcggactatgacggggcggctgtctcgctcgtctggggg
ctcgacggggtgcagggcgcgccgatcccgcaaggcagccgggtggcggtgcaggtcagt
ggcgccgagattgccggctttgacggcggtccgacctcggcgggcttcggggtggcgacg
gacgctgcgtccggggtcaccgcagtcgtccagacccaggcgctcgctatcggtgcggcg
ccgctcagtatcccgctgatcacgtcggcaccgacggtcagcaacgtcgcgatcaacggc
gccgcggtcgaggccagcgtcaccaccagcgcagcggcgagcgagggctggctgctgcgt
ggcgacgatgtcgttgccgggccggtggcggcggccagcggcaagctgaccttcacctat
gccgcgagtggcgctgtcggcctgaccgtggtcgcgcgcggcaagtcgagcgacggcaag
accaccggtccgcgcagcgcgccggcgactttgcttgcgacagcgcccgcgcccgttgcc
gtcacgatccagaccgatccgtcgaacagcgccaactggcaggtcgcctgccattgggcg
ccgctgccggacagcccgtcaagcgtggccagctatacggtcagcgtcatgcaaagcggc
agcgccacgccgctggcgactgcgacgaccagcggggtggcggcggtgctcagcttcgcc
aagacggcgatcaccgcgggtgcgacccagacgctctcgctgctggcaaccggcgtcagc
ggcggtacgtcgcctgccgcggcccagccgctcgccttcgtcacaccgacgctggcaacg
gtcaccgccagtgccgatcagctcgcggtggcatggacggcgcccacagggctccccgcc
gggccggatgcggcctatgcaatcagggtcattaacggcgctggtgcaggcgcgaaccag
acgctgctcgttggcgcgccgaccggcggcaccgccgcagccgtaccgctggcgggcctt
tcggtgccggctggcggcagcgcggttgccatggtcgatctgctcttggggccggtgcgt
gtcattgccgaccggtcgatggcggccggccagcaggcgaccgcgatcctcgccgcgccg
cgcatcgcggcggcggcgaccaaccccgcgaccggactggccacgttgaactgggcggat
gccggaaccggcatcagctacgcgctgcaattctccgacggcacgagccagtcgagcagc
acgacaagctacacgctgaccagcgcggccggggtcgatgccgggctgcgctatcaggtc
gcctcgacgcagaccgccaacggcgtgatcgtgaccggtccgtacagcgccgcggtcgcg
gtcccgaccgcggcggatacgctggcggctgcacgctatgacgggatcgcggtaaccgcc
agctgggaggcgcatggcagcgcggacgcccatattctgtcgatctacgacaatgctacc
accgcgaccgccgctgccagcgtgaccgtcaacgggacggcgggctcgctcgctttcgcg
gcggatccggccaagacctattcggtctatgtccagccggtcaccgccgagggggtcggt
ctttcggccaatgcgataccgttgttcgccccggcctttttcctgagccagcagccggcg
gcgagcgcgacgccctatgcctatccggcgacggcgcaagccaatctgggcagcgatgcg
gccaacccgcctgcggaggcgatcaccctctatcttccgcaactcggcctgacgacggac
gcgctcggcccgaatccgatcgtcagcgggccgttcacggtcgcggcatcgggcgacgcc
gatctgccgtacaagctgaccatcgcggccgacacggcggtatggagcttcgacaccacc
tcggtccgtccggcgctgcagacggactatgtccagctgctcaccagcctggaagcgccg
gggacggggctggcgggggccagtccttacggcatctacctggtgcagaatgcgatcggg
cggatgatgccccagaccttcgacgagcagctctactataattacgggctgtcactctcg
accagcgcgggcagcgcttatgtcgacctgcgtccgggaatggtgctgcgcgtcgtgctc
agcgactatgtcagcatcaacgagcagtcgctgccgacatggctcaacggctatgccggc
gccacggtgttcgacttcgaggttggcagctatcacacaaatggtgcctggcgcgtcggt
ttcgacgggttcctgaaccagctggcctcgcacaacgcgctgcaggtcccggcaccgttc
aagagcacaacgggcatgggccagtcgggcgtggcggcggcggcagacctttactatccg
cagttccagcagccctatttccgcgcgttcgtgccagccaccttgctctcgccaagcagc
acgaccaacgccaatcagaccaacctcaacttcgccatcgtcgcggcggcgagctttacc
gcgatcaacggcgcgacccccaatccacagcaatatgccaccgcctatttccgggggcga
agcacattggaagcgatgatccgggtgcgtgtcgacggcggcgagcggctggttccggtc
ggaacgagtctcggtaatctgctcgagcaactccagcgaaggccgaacgcggcaggccgg
agcggcggtctgcgtctgctgcgcgcgagtggcccaggccagaccgccacgtctgcggcg
ggcagcctcgcggcgcagctggaggtgatgctcgattggcagggtggggtggtctacaca
gcgggcagcgggctggacggttactcgctgccattgctcgcgggcgaccagatcctgacc
gctgggttctga
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