KEGG   Sphingomonas koreensis: BRX40_19475
Entry
BRX40_19475       CDS       T04828                                 
Name
(GenBank) murein L,D-transpeptidase
  KO
K21470  L,D-transpeptidase YcbB
Organism
skr  Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:skr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:skr01002]
    BRX40_19475
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:skr01011]
    BRX40_19475
Peptidases and inhibitors [BR:skr01002]
 Cysteine peptidases
  Family C82
   BRX40_19475
Peptidoglycan biosynthesis and degradation proteins [BR:skr01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   BRX40_19475
SSDB
Motif
Pfam: YkuD Scaffold PG_binding_1
Other DBs
NCBI-ProteinID: APR54303
UniProt: A0A1L6JEF5
LinkDB
Position
4022757..4024256
AA seq 499 aa
MFGRSRSHGVAALPLLGLALGAPALAQQGAPRPPAVTATPTSPQAAPPAAPVQITPVQIP
LPVLSPEQAQQVRQLIVQGRIAQGLRYSTAEAEVLPADDQGLVRAALDYARAIHIGRLDT
ADFQEDWALRPAAWDPLPGFAKAVADNRIGQWFAGLTPQYEGYDNLRKGLARYRRIETAG
GWGTIPAGPDLSAGSSGPRVAALRARLAVEDGEVTGSGDKFDTALKEAVVRAQRRYGLAP
TGTVSTGTLSALNVPVSSRVRQIMANMERWRWMPKEMPVDRIQVNIAAAQVAVFEGDRPV
MSMRGVTGKPGGGETPMLQSSIHSVVLNPPWNVPAGIAQRELFPKGAAYLARNGFKVIGT
GPNRRLQQSPAQSALGKYKFDFNNPFAVYLHDTPSKGTFSRFDRLASHGCIRLERPADLA
RLLLEGSTQWTPEAIDGALAKGETVRAALPNQVAVYLLYWTAYASGTGTMNFRGDPYGWD
KTLATKIEKRSAAQALAAR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgttcggacgatcgcggtcgcatggtgttgcggcgctgcccttgctcggtcttgccctc
ggcgcgcctgcgctcgcgcagcagggtgcaccgcgcccgcccgccgttacagcaaccccg
acatctccgcaggcagcgcccccggctgcaccagtccagatcacgccggtccaaatcccg
ctgcccgtgctcagcccggagcaggcgcagcaggtgcgccagttgatcgtgcagggccgg
atcgcgcagggtctgcgctattcgaccgccgaggccgaagtgctgcccgccgacgatcag
ggtctggtccgcgctgcgctggactatgcccgcgcgatccatatcggccgcctcgacacc
gccgatttccaggaggattgggcccttcgccccgccgcatgggatccgctgcccggcttt
gccaaggccgtcgcggacaaccggatcggccaatggttcgcgggcctgaccccgcagtac
gaaggctatgacaatctgcgcaagggccttgcccgctaccgccggatcgagaccgcgggc
ggatggggcaccattcccgccggcccggacctgtctgccgggtcgagcggcccgcgtgtc
gccgcgctgcgcgcccgcctcgcggtcgaggatggcgaagtcaccggcagcggcgacaag
ttcgacaccgcgcttaaggaagccgtcgtccgcgcccagcgccgctatggcctggcaccg
accggtaccgtctccaccggtacgctttcggcgctcaacgtccccgtctccagccgtgtc
cgccagatcatggcgaacatggagcgctggcgctggatgccgaaggagatgccggtcgac
cgcattcaagtgaacatcgccgccgctcaggtcgcggtattcgagggcgatcgcccggtg
atgtcgatgcgcggggtgaccggcaagcccggcggcggcgagacgccgatgcttcagtcg
agcattcattcggtcgtactcaacccgccatggaacgtccccgcaggcatcgcccagcgc
gagctgttccccaagggagcggcctatctcgcccgcaacgggttcaaggtgatcggtacc
ggtcccaaccgccggctccagcagtcgcccgcgcagtcagcgctgggcaaatacaagttc
gacttcaacaacccgttcgcggtctatctgcacgatacgccgagcaagggcaccttctcg
cgtttcgaccggctcgcctcgcacggctgcatccggctcgagcggcccgccgaccttgcg
cggctgctgctcgagggcagcacgcaatggacccccgaggcgatcgatggtgcgctggcg
aagggcgagacggtgcgtgccgcgctgcccaaccaggtggcggtctacctgctctactgg
accgcttatgcgagcggcaccggcacgatgaatttccgcggcgatccctatggctgggac
aagacgctcgcgaccaagatcgagaagcggagcgctgctcaggcgctcgccgcgcgctga

DBGET integrated database retrieval system