Sphingomonas koreensis: BRX40_19475
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Entry
BRX40_19475 CDS
T04828
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
skr01002
]
BRX40_19475
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skr01011
]
BRX40_19475
Peptidases and inhibitors [BR:
skr01002
]
Cysteine peptidases
Family C82
BRX40_19475
Peptidoglycan biosynthesis and degradation proteins [BR:
skr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BRX40_19475
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
APR54303
UniProt:
A0A1L6JEF5
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All DBs
Position
4022757..4024256
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AA seq
499 aa
AA seq
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MFGRSRSHGVAALPLLGLALGAPALAQQGAPRPPAVTATPTSPQAAPPAAPVQITPVQIP
LPVLSPEQAQQVRQLIVQGRIAQGLRYSTAEAEVLPADDQGLVRAALDYARAIHIGRLDT
ADFQEDWALRPAAWDPLPGFAKAVADNRIGQWFAGLTPQYEGYDNLRKGLARYRRIETAG
GWGTIPAGPDLSAGSSGPRVAALRARLAVEDGEVTGSGDKFDTALKEAVVRAQRRYGLAP
TGTVSTGTLSALNVPVSSRVRQIMANMERWRWMPKEMPVDRIQVNIAAAQVAVFEGDRPV
MSMRGVTGKPGGGETPMLQSSIHSVVLNPPWNVPAGIAQRELFPKGAAYLARNGFKVIGT
GPNRRLQQSPAQSALGKYKFDFNNPFAVYLHDTPSKGTFSRFDRLASHGCIRLERPADLA
RLLLEGSTQWTPEAIDGALAKGETVRAALPNQVAVYLLYWTAYASGTGTMNFRGDPYGWD
KTLATKIEKRSAAQALAAR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacgatcgcggtcgcatggtgttgcggcgctgcccttgctcggtcttgccctc
ggcgcgcctgcgctcgcgcagcagggtgcaccgcgcccgcccgccgttacagcaaccccg
acatctccgcaggcagcgcccccggctgcaccagtccagatcacgccggtccaaatcccg
ctgcccgtgctcagcccggagcaggcgcagcaggtgcgccagttgatcgtgcagggccgg
atcgcgcagggtctgcgctattcgaccgccgaggccgaagtgctgcccgccgacgatcag
ggtctggtccgcgctgcgctggactatgcccgcgcgatccatatcggccgcctcgacacc
gccgatttccaggaggattgggcccttcgccccgccgcatgggatccgctgcccggcttt
gccaaggccgtcgcggacaaccggatcggccaatggttcgcgggcctgaccccgcagtac
gaaggctatgacaatctgcgcaagggccttgcccgctaccgccggatcgagaccgcgggc
ggatggggcaccattcccgccggcccggacctgtctgccgggtcgagcggcccgcgtgtc
gccgcgctgcgcgcccgcctcgcggtcgaggatggcgaagtcaccggcagcggcgacaag
ttcgacaccgcgcttaaggaagccgtcgtccgcgcccagcgccgctatggcctggcaccg
accggtaccgtctccaccggtacgctttcggcgctcaacgtccccgtctccagccgtgtc
cgccagatcatggcgaacatggagcgctggcgctggatgccgaaggagatgccggtcgac
cgcattcaagtgaacatcgccgccgctcaggtcgcggtattcgagggcgatcgcccggtg
atgtcgatgcgcggggtgaccggcaagcccggcggcggcgagacgccgatgcttcagtcg
agcattcattcggtcgtactcaacccgccatggaacgtccccgcaggcatcgcccagcgc
gagctgttccccaagggagcggcctatctcgcccgcaacgggttcaaggtgatcggtacc
ggtcccaaccgccggctccagcagtcgcccgcgcagtcagcgctgggcaaatacaagttc
gacttcaacaacccgttcgcggtctatctgcacgatacgccgagcaagggcaccttctcg
cgtttcgaccggctcgcctcgcacggctgcatccggctcgagcggcccgccgaccttgcg
cggctgctgctcgagggcagcacgcaatggacccccgaggcgatcgatggtgcgctggcg
aagggcgagacggtgcgtgccgcgctgcccaaccaggtggcggtctacctgctctactgg
accgcttatgcgagcggcaccggcacgatgaatttccgcggcgatccctatggctgggac
aagacgctcgcgaccaagatcgagaagcggagcgctgctcaggcgctcgccgcgcgctga
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