KEGG   Sphingomonas koreensis: BRX40_21090
Entry
BRX40_21090       CDS       T04828                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
skr  Sphingomonas koreensis
Pathway
skr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:skr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BRX40_21090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:skr02044]
    BRX40_21090
Enzymes [BR:skr01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     BRX40_21090
Secretion system [BR:skr02044]
 Type IV secretion system
  Trb secretion system protein
   BRX40_21090
SSDB
Motif
Pfam: T2SSE Zeta_toxin nSTAND3 ABC_tran Dynamin_N FtsK_SpoIIIE TrwB_AAD_bind DEAD Mg_chelatase AAA_16 AAA_28 ATPase AAA_7 IstB_IS21 GTP_EFTU AAA_29 MMR_HSR1 CLP1_P ATPase_2 CbiA MobB PduV-EutP AAA_19
Other DBs
NCBI-ProteinID: APR55230
UniProt: A0A1L6JI94
LinkDB
Position
complement(4335511..4336464)
AA seq 317 aa
MLRTAMGPAIAAALADPLVLEVMINPDGALRLDRLGEGRTDTGIRFEPAQVERIIRLVAS
HARIEVHAASPIVSAELPPHGEGAGERFEGVLPPVSLAPCFSIRKPAIRIYTLLDYVADE
IMSAEMARLLSLAVVERRNILVAGGTSSGKTTLANALLGEMAHLDERVILIEDTRELQSP
APDTVALRTRAGHVTMADLVRSTLRLRPDRIIVGEVRGGEALDMLKAWNTGHPGGIATVH
ANSAASALLRIEQLIQEAVVTVPRRLIADAIDLVVFIAGRGSARRVDTLARVAGLDPDGD
YALFDHPLDFARAPQGD
NT seq 954 nt   +upstreamnt  +downstreamnt
atgctgcgcactgcgatggggccagctatcgccgcagccctcgccgacccgctcgtactc
gaggtgatgataaacccggatggcgcgctgcggctcgatcggctgggcgaagggcggacc
gataccggcatccgcttcgagccggcccaggtcgagcgcattattcggctcgtcgccagc
cacgcccgtattgaggtgcatgctgcgtcgccgatcgtctcggccgagctgccgccgcat
ggcgaaggcgctggcgagcggttcgaaggcgtgctgcccccggtcagcctcgcgccctgc
ttctcgatccgcaagccggcgattcgcatctacacgctgctcgactatgtcgctgacgag
atcatgtcggccgagatggcgcgcctgctgtcgctggctgtggtcgaacgccgcaacatc
ctcgtcgccggcggcaccagttcgggcaagacgacgctggccaacgcgctgctcggcgaa
atggcgcatctagacgagcgggtgatcctgatcgaggacacgcgcgagttgcagtcgcct
gcgcccgataccgtcgcgctgcgcacccgcgccggccatgtcaccatggctgatctggtc
cgctcgacgctgcgcctgcggcccgaccgcatcatcgtcggcgaggtacgcggcggcgag
gcgctcgatatgctcaaggcttggaacaccggccaccccggcggaatcgctaccgtccat
gccaatagcgcagcctccgcgctgctgcgcatcgagcaactgatccaggaagccgtggtc
accgtgccccgccggttgatcgccgatgcgatcgatctggtcgtgttcatcgccgggcgg
ggttcggctcgccgggtggacacgctcgcacgcgtcgccggcctcgatcctgacggcgac
tacgctcttttcgaccaccccctcgatttcgcccgcgcacctcaaggagattga

DBGET integrated database retrieval system