Sphingomonas koreensis: BRX40_22285
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Entry
BRX40_22285 CDS
T04828
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
skr
Sphingomonas koreensis
Pathway
skr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRX40_22285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skr03019
]
BRX40_22285
03110 Chaperones and folding catalysts [BR:
skr03110
]
BRX40_22285
03029 Mitochondrial biogenesis [BR:
skr03029
]
BRX40_22285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skr04147
]
BRX40_22285
Messenger RNA biogenesis [BR:
skr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BRX40_22285
Chaperones and folding catalysts [BR:
skr03110
]
Heat shock proteins
HSP70 / DNAK
BRX40_22285
Mitochondrial biogenesis [BR:
skr03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
BRX40_22285
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
BRX40_22285
Exosome [BR:
skr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BRX40_22285
Exosomal proteins of breast cancer cells
BRX40_22285
Exosomal proteins of colorectal cancer cells
BRX40_22285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Alp7A_like_C
Motif
Other DBs
NCBI-ProteinID:
APR55332
UniProt:
A0A1L6JHD4
LinkDB
All DBs
Position
tig00000001:complement(106163..108037)
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AA seq
624 aa
AA seq
DB search
MAKAIGIDLGTTNSCVAVMEGKEPKVIENAEGARTTPSMVAFRPDGEVLVGAAAKRQAIT
NPEQTLFAIKRLIGRRYDDPIVQKDKGMVPYKIVPGANGDAWVEVNGKKSSPSEISAHIL
RKMKETAEKYLGEPVTEAVITVPAYFNDAQRQATKDAGTIAGLEVLRIINEPTAAALAYG
LEKKKAGTIAVYDLGGGTFDVSILELGDGVFEVKSTNGDTFLGGEDFDKRIIDFLADEFR
KEQGIDLRQDRLALQRLKEAAEKAKIELSSASQTSVNLPFITADQSGPKHLDISLTRAKL
EALVDDLISRTMGPCKAALEDAGLNADQLDEVVLVGGMTRMPKVVEAVKTIFGREPHQGV
NPDEVVALGAAIQAGVLKGQVEDVLLLDVTPLSLGIETLGGVMTKLIDRNTTIPTKKSQT
FSTAEDNQPAVTIRVFQGEREMAEDNKLLGQFNLENIAPAPRGVPQIEVTFDIDANGIVN
VSATDKGTGREQKITIQSSGGLSEEDIKRAVRDAEEHASEDRKRRELAEAKNQSDALIFL
SEKTLADAGDRVAAADRQAVEDAVSNLKTAMQGDQIEDIRARGEDLQSATQKVASAQRAE
PGSTSSADDGIVDAEFEEADDAKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaatcggcatcgatctcggcaccaccaattcctgcgtcgcggtgatggag
ggcaaagagcccaaggtcatcgagaatgccgaaggtgcccggaccaccccatccatggtg
gccttccgccccgatggcgaggtactggtgggagccgccgcgaagcgtcaggccattacc
aatcccgagcagacgctctttgcgatcaagcgcctgatcggacgccgctacgatgacccc
atcgtccagaaggacaagggcatggtgccctacaagatcgttcccggcgccaatggtgac
gcctgggtggaggtgaacgggaagaagtcgagccccagcgagatctccgcgcacatcctg
cgcaagatgaaggagactgccgagaaatatctgggcgagccggtcaccgaagccgtcatc
accgttccggcctatttcaacgacgcccagcggcaggcgaccaaggatgcggggaccatc
gccggtctcgaggttctgcgcatcatcaatgagccaacggctgccgcccttgcctatggg
ctggaaaagaagaaggcaggcacgatcgcggtttatgatcttggcggcggcacgttcgac
gtatccattctcgaactcggcgatggcgtgttcgaagtgaagtcgaccaacggcgacacc
tttctcggcggcgaggatttcgacaagcggatcatcgactttctcgcggacgagttccgc
aaggagcaggggatcgatctgcgccaggaccggctcgcgctccagcgcctgaaagaggcg
gccgagaaggcgaagatcgagctcagttcggcatcgcagacgagtgtcaacctgcctttc
attaccgcggatcaatccggtccgaagcatctcgacatcagcctcacgcgcgccaagctc
gaggcgctggtcgatgatctcatctcccgcaccatggggccgtgcaaggcggcgctggag
gatgcagggcttaatgccgatcagctcgacgaagttgtgctggtcggcgggatgacccgc
atgccgaaggtcgtcgaggcggtgaagactatcttcgggcgcgagccgcaccagggcgtc
aaccctgacgaggtcgtggcacttggcgcagcgatccaggcgggcgtgctgaagggccag
gtcgaagacgtgctgcttctcgacgtcacgccattgtcgttgggcatcgagacgctcggc
ggcgtgatgaccaagctcatcgaccggaacacgacgatacctaccaagaagagccagacc
ttctcgacggcggaggacaaccagcccgctgtgacgatcagggtcttccagggcgagcgg
gaaatggccgaggacaacaagctcctcggccagttcaatctcgagaacatcgcaccggcg
ccccgaggcgtgccgcagatcgaggtgacgttcgatatcgatgcaaacggcatcgtgaac
gtttccgcgacagacaaggggaccgggcgcgagcagaagatcaccatccagtcgtcgggc
ggactgagcgaagaggacatcaagcgtgcggtcagggacgccgaagagcatgccagcgag
gacaggaagcggcgcgaactggcggaagcgaagaaccagtccgacgctttgatcttcctc
tccgaaaagacgcttgcggatgcaggggatcgcgttgcggccgcggatcggcaagccgtc
gaagacgcggtttcgaacctgaagacggccatgcagggcgaccagatcgaggacatccgc
gcgcgcggcgaggatctgcagtctgcgacccagaaggtcgccagcgcccagcgcgccgag
ccgggcagtacatcgtcggctgatgacgggatcgtggacgccgagttcgaggaggcggac
gacgcgaagaagtga
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