Sphingomonas koreensis: BRX40_22460
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Entry
BRX40_22460 CDS
T04828
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
BRX40_22460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
RecA
DnaB_C
MEDS
IstB_IS21
nSTAND3
NPHP3_N
SLFN-g3_helicase
GvpD_P-loop
PAXNEB
AAA_24
AAA_22
AAA_7
AAA_30
NACHT
AAA_5
AAA_14
AAA_19
ResIII
AAA_33
Rad51
DEAD
AAA_11
ABC_tran
PhoH
AAA
ATPase_2
AAA_18
divDNAB
nSTAND1
DUF87
Motif
Other DBs
NCBI-ProteinID:
APR55361
UniProt:
A0A1L6JHG6
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All DBs
Position
tig00000001:complement(142460..143941)
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AA seq
493 aa
AA seq
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MNSEEPAGTGVPGLDDILGGGLSRGRVFLLEGLPGTGKTTVAMQFLLEGARNGEKVLYLT
LSESEEELRAAAAAHGWALDGVEIVELISPDSLVDEKQQQSLLYSSDLELVETTRRIFEA
FTRSKPDRLVLDSLSEIRLLSQSSLRYRRQVLALKHYFAGQGTIVLMLDDMTTETEDKTV
HSVAHGVVCLEELAREYGPERRRIRVAKYRGRGFRGGYHDFVIERGGARVFPRLISAEHR
SSFERDKVTTEITELDALTGGGLERGSSVLILGPAGTGKSLLVLTFVAAAVKKGEKAALF
VFDEEVGLLAERARGLGIDIIAMMDAGALQVEQIDAAELTPGELSARVRKCVEENGARTV
VVDSLNGYQAAMPGENALVLHMHELLQYLNRQAATTFVTIAQHGLVGDTRTPVDVTYLAD
TVILLRYFETCGRLRRAISVVKKRTGAHEDTIREYSIGADGVRIGEALVSFQGMARGVRS
LFGDAPELIEERH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagcgaagagcctgctggaacgggagtgccgggccttgatgacatcctcggtgga
gggttgagccgcggcagagtctttctcctcgagggcctgccgggaacgggcaagaccacg
gtcgcgatgcagttcctgctcgaaggggcccggaacggagagaaggtgctgtatctgacg
ctctccgaaagcgaggaagagctgcgcgccgccgccgcagcgcacgggtgggcgctcgac
ggcgtcgagatcgtcgagttgatctcccccgatagcctcgttgacgagaagcagcagcag
agcttgctctactcgtcggacctcgagctggtggagacgacccggagaatattcgaagcc
ttcacgcgatcgaagcccgaccggctggtccttgacagcctctcggaaataagactgctg
tcgcagagctcgctccgctaccggcgacaggtcctcgcgttaaagcactatttcgcgggc
cagggcacgatcgtgctgatgctcgacgacatgacgacggagaccgaagacaagaccgtt
cacagcgtcgcgcatggtgtggtctgcctggaggagctcgcaagagaatacggtccggag
cgccggcggatcagggtcgccaaatatcgcgggcgaggctttcgcggcggctatcacgac
ttcgtcatcgaacgaggcggcgcccgcgtatttccgcgcctgatctcggccgagcaccgg
tccagcttcgagcgcgacaaggtcacgaccgagatcaccgaactggacgcgctgacgggg
ggtggtctggagcgtggatcgagcgtgctgatcctgggccctgcaggaacggggaagtct
cttctcgtgctgacgttcgtcgccgcggccgtgaagaaaggagagaaggcggcgttgttc
gtgttcgacgaggaggtcgggctccttgccgaacgcgcaagagggctcggaatcgacatc
atcgcgatgatggacgccggtgccttgcaggtcgagcagatcgacgccgccgagctcacc
cccggagagctttcagcgcgggtccggaaatgcgtcgaggagaatggcgcgaggacggtg
gtggtggatagccttaatggttaccaggccgcgatgccgggcgagaacgccttggtgctg
catatgcacgagctgctgcagtatctgaaccgccaggccgcaacgacgttcgtgaccatc
gcgcagcacgggctggtcggcgatacgcgaacccccgtcgatgtcacctatctcgccgac
acggtgatcttgctgcgctacttcgagacctgcggccgtctccgccgggcgatttcggtc
gtgaagaagcgaaccggtgcgcatgaagacaccatccgcgaatatagcattggcgccgac
ggggtccggatcggcgaagcgctggtctcgtttcagggaatggcgcgtggcgtgcgcagc
ctctttggggatgcacctgagctgatcgaagaacgccattga
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