Salinivibrio kushneri: FCN78_00920
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Entry
FCN78_00920 CDS
T05956
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCN78_00920 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_00920 (mutM)
Enzymes [BR:
sks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FCN78_00920 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FCN78_00920 (mutM)
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCN78_00920 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Zn-ribbon_8
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCP01083
LinkDB
All DBs
Position
1:196230..197042
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AA seq
270 aa
AA seq
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MPELPEVEVSRLGIMPYVEGQTVTEITIRQPKLRWPIPETLQQLKGQVIRRVTRRAKYLL
LETDVGTAIVHLGMSGSLRVLPTSLAPEKHDHVDVTLSNGRLIRYHDPRRFGAWLWQEGD
LPHPVLGKLGPEPLTDAFNADYLLAKAAGKKMAMKSFIMDNAVVVGVGNIYANESLFCAG
IHPKRPAGSLTQTEATALVDEIKTVLAAAITQGGTTLKDFTQVDGKAGYFAQALRVYGKS
GEPCPTCDTTLERIVIGQRATVFCPQCQPL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacctgaagtagaagtaagtcgtttaggtatcatgccgtatgtcgaaggg
caaacggtcaccgagattaccattcgtcagcccaagctacgttggcccattcccgaaacg
ttacaacagttaaaaggtcaggtgatccgccgggtgacccgtcgggccaagtatctttta
ttggagacggatgtcggtacggcgattgtgcatttggggatgtcaggcagtttgcgggta
cttcccacgtcactggcaccggaaaaacatgatcatgttgatgtgacactcagcaatggt
cgcttaattcgttaccacgatccgcgccgctttggcgcctggttgtggcaggagggagat
ttgccgcatcccgtgttgggaaaactcggccctgaaccactcaccgatgcgttcaatgca
gattatttgctggccaaggcggcaggcaaaaaaatggcgatgaaaagctttattatggac
aacgccgttgtggtaggtgtggggaatatttatgccaacgaatcgctgttttgtgctggt
atccatcctaaacgccctgccggtagcctgacgcaaacagaagcgacggcgctggtggat
gagataaaaactgtgttagcggcggcaatcacacaaggcggtaccacgctgaaagacttt
acccaagtagacgggaaggccggttatttcgctcaagcgctacgtgtttacggtaagtcg
ggtgagccgtgcccaacctgtgacacgacccttgagcgcatagtcatcggccagcgagca
accgtgttttgcccgcaatgccagcctttatga
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