Salinivibrio kushneri: FCN78_00980
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Entry
FCN78_00980 CDS
T05956
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sks
Salinivibrio kushneri
Pathway
sks00541
Biosynthesis of various nucleotide sugars
sks01100
Metabolic pathways
sks01250
Biosynthesis of nucleotide sugars
Module
sks_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FCN78_00980 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sks01005
]
FCN78_00980 (rfaD)
Enzymes [BR:
sks01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FCN78_00980 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sks01005
]
Core region
FCN78_00980 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
KR
Polysacc_synt_2
Phage_T7_Capsid
ThiF
adh_short
TrkA_N
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QCP01094
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Position
1:complement(207868..208812)
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AA seq
314 aa
AA seq
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MIFVTGGAGMIGSNLVKALNEQGYRDIVVVDNLKDGTKFVNLVDLDIADYMDKEDFLTQI
MAGENFGPIEAIFHQGACSATTEWDGKYMMLNNYEYSKELLHYCIDRDIPFLYASSAATY
GGRDSDFIEAPEYEGALNVYGYSKQQFDNYVRRVQEDAKAHGETLPPITGLRYFNVYGPR
EQHKGSMASVAYHLNQQILKGENPKLFEGSDTFKRDFVYVGDVCAMNIWFWQQQISGIYN
CGTGRAEPFSAVANAVIDFHGQGEIEEIPFPDHLKGRYQAYTQADLTKVREAGYTASFKT
VAEGVAAYLAEINR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgtgactggtggtgctggcatgattggcagcaacttagtaaaagcactgaac
gagcaaggctaccgtgacatcgtggtcgtcgataacctcaaagacggcaccaaattcgtt
aacctggttgacctcgacattgcagattatatggataaggaagacttccttacccaaatc
atggccggtgagaacttcggcccgatcgaagccattttccaccaaggtgcctgctcggcc
accacagagtgggatggcaaatacatgatgctcaacaactacgagtactccaaagagctg
ttgcattattgtattgatcgcgatatcccctttctttatgcctcgtcagcagccacctat
ggtggccgcgacagtgactttattgaagcgccagagtatgaaggcgcgctgaatgtgtac
gggtattccaaacagcaattcgacaactatgtccgtcgcgtgcaagaagatgctaaggcc
catggcgagacactgccaccgattactggcttacgctacttcaatgtatatggtccgcga
gaacagcacaaaggcagcatggcgtcagtggcttatcacctcaatcaacaaattctaaaa
ggcgaaaaccctaaactttttgagggcagtgatacgttcaagcgtgactttgtctatgtc
ggtgatgtctgcgcaatgaacatttggttctggcaacaacagatcagcggtatttacaac
tgcggtaccggtcgtgcagagccctttagcgccgttgccaacgcggtgattgacttccac
ggtcaaggagagatcgaggaaatcccctttcccgaccacctaaaaggtcgctaccaagcc
tacacacaagccgatctgaccaaggtacgtgaagcgggatacacggcatcctttaagaca
gtggcagaaggtgtcgccgcttacctagccgaaatcaatcgctaa
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