Salinivibrio kushneri: FCN78_01570
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Entry
FCN78_01570 CDS
T05956
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCN78_01570 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sks03021
]
FCN78_01570 (rpoA)
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_01570 (rpoA)
Enzymes [BR:
sks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCN78_01570 (rpoA)
Transcription machinery [BR:
sks03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FCN78_01570 (rpoA)
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FCN78_01570 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF4843
Motif
Other DBs
NCBI-ProteinID:
QCP01205
LinkDB
All DBs
Position
1:314220..315209
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVILTLTKSGAGPVVAGDITHDGG
VEIANPEHVICHLTDASAEISMRIKVERGRGYVPASARIDSEDDERPIGRLLVDATFSPV
DRIAYKVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccgcgtctagttgatattgaacaagttagc
tcgacgcacgcaaaagtaactcttgaacccctagagcgtggctttggccatactctgggg
aatgcgctacgtcgtatcctactttcatctatgccaggctgtgcggtgacggaagttgaa
attgacggcgtattgcacgagtacagcaccaaagaaggggttcaggaagatatcctggaa
atcctacttaaccttaaaggcctagccgttaaggttgagggtaaagatgaagttatcctt
actctgaccaagtctggtgcaggccctgttgttgcaggcgacatcacccatgatggtggt
gttgagattgcgaacccagaacacgttatctgccacctgactgatgcaagcgctgaaatt
agcatgcgtatcaaggtagaacgtggtcgtggctatgtaccagcgtctgcgcgtatcgat
agcgaagacgacgagcgtccaatcggtcgcctacttgttgacgcaacgttcagcccagta
gatcgcattgcttacaaagtggaagcagcgcgtgtcgaacagcgtacggacctcgacaag
ctggtcatcgatatggaaactaacggtacactggatcctgaggaagcgattcgccgtgcg
gcaaccatcctagcagagcagctagatgcgtttgttgacctgcgtgatgtacgtgtccct
gaggagaaagaagagaagccagagttcgatccgatcctactgcgtcctgtagacgatctt
gaactaactgttcgctctgctaactgtttgaaagcagaagcgattcactatatcggtgat
ctggtacagcgtaccgaggttgagcttctgaaaacgccaaaccttggtaagaagtctttg
actgaaattaaagacgtgctggcatcacgtggtctgtctctaggtatgcgcctagaaaac
tggccgccagcatccattgctgaagattaa
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