Salinivibrio kushneri: FCN78_02350
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Entry
FCN78_02350 CDS
T05956
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sks03016
]
FCN78_02350 (thpR)
Enzymes [BR:
sks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FCN78_02350 (thpR)
Transfer RNA biogenesis [BR:
sks03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FCN78_02350 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QCP01343
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All DBs
Position
1:485215..485766
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AA seq
183 aa
AA seq
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MRLFFALGLDEKTNQAAREQLVRYHHHLCGEGRAVPDQNLHLTLAFLGEVPDTKLSALQA
AASNLALPAFSLTTSGVEVWDQPKIACVTFNQPPPVLFDLAHHLQSLPVWHAKADSHAFT
PHITLRRGVKDQQALHLPPLPTQTFACQRFGLYASPSSASDESIPRDNEGRALYQCLHQF
SLC
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcgactatttttcgcattaggtttggacgagaaaaccaatcaagccgctcgggagcaa
ctggttcgctaccaccatcatctttgtggtgaggggcgcgcggtgcccgatcagaactta
cacctcaccttggcgtttttaggtgaggtccctgataccaagctctctgcgctccaagcc
gcggcaagtaacctggctctgcctgcgttttctctcacaacctcaggtgttgaagtatgg
gatcagccgaaaattgcgtgtgtgacgttcaaccaacccccgccggtattgtttgatcta
gcccatcacttacaaagcttacccgtttggcacgcaaaagcggacagtcatgcgtttacg
ccgcatattaccttgcgtcgtggcgtcaaggatcaacaagctttacacctaccacctctg
ccaacacagacatttgcctgtcaacggtttgggttatatgcttcgccttcctccgcgtcg
gatgaatcgataccgcgagataatgaggggcgggcgttataccaatgcctgcatcaattc
agcctttgttaa
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