Salinivibrio kushneri: FCN78_02370
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Entry
FCN78_02370 CDS
T05956
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN78_02370 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sks03019
]
FCN78_02370 (pcnB)
Enzymes [BR:
sks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FCN78_02370 (pcnB)
Messenger RNA biogenesis [BR:
sks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FCN78_02370 (pcnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
GPAT_C
Gad2
DUF6932
Motif
Other DBs
NCBI-ProteinID:
QCP01347
LinkDB
All DBs
Position
1:488232..489620
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AA seq
462 aa
AA seq
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MTSFCRKVLNRDSKTRAIEDLKLEVIPRKAHGISRKGISENALKVLYRLHKAGFEAYLVG
GGVRDLLLGREPKDFDIATDATPDEVKKLFRNCRLIGRRFRLAHILFGRDVIEVATFRGH
HGKGEKDKQTARSEDGMLLRDNVYGTIDEDAQRRDFTVNGLYYNIADFSIRDYAGGLDDL
NNRVIRLIGDPETRYREDPVRMLRAVRFAVKLDMTINSATAAPIVELAPLLQDIPAARMF
EESLKLLQSGQGVATYQMLREYNLFQQLFPAVAAHFTETQTSQTEQMLEQVLRSTDKRVV
NEQRINPAFLFAAMLWYPLVTRAEEMAFESGLSYYDAFMVAASDIVDEQVKTIAIPRRFT
AMIREVWQLQMRMTRRTGARAFKTLDEKKFRAAFDLLEMRGAVEGEETEALCAWWRDFQR
ADQSGRQKMVRAINKAHNTRKPKSRRRKGPPRRRKPQSNSDA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcttttgccgtaaggttctgaatcgtgatagtaaaacacgcgcaattgaggat
cttaagttggaagttatcccccgcaaagcacatggcatttcgcgcaaaggtatcagcgaa
aatgcgctgaaagtgctttatcgcctgcacaaagcgggctttgaagcgtacctcgttggt
ggcggtgtgcgagaccttttattggggcgtgaacccaaagactttgatattgccaccgat
gccaccccagatgaagtcaaaaagctgtttcgtaactgtcgactcattgggcggcgtttt
cgtcttgcccacatcctatttggccgcgatgtgattgaggtggccacattccgaggccac
cacggcaaaggcgagaaagataagcaaacggctcgctcagaagatgggatgctattgcgt
gacaatgtatatggcaccatcgatgaagacgcgcagcgccgtgactttacggtgaacggg
ctgtattacaatatcgccgacttttctattcgggattacgcaggggggcttgatgatctc
aataaccgcgttatccgcctgatcggtgatcctgaaacgcgctaccgtgaagatccagta
cggatgttacgcgcggtgcgctttgcggttaagctcgatatgacgattaacagcgcgacc
gccgcgccgattgtcgagcttgcgccgttattgcaagatatcccagccgctcgaatgttt
gaagaaagcttgaagttgttgcaatccggtcaaggggtcgcgacatatcaaatgttgcgc
gagtacaatttatttcagcaactcttcccggcagtggccgcacactttaccgagacacaa
accagccaaacagagcaaatgctagagcaggtattacgctcaaccgataagcgggtggtt
aacgaacaacgcattaacccggctttcttatttgccgccatgctttggtatcctttggtg
acacgggcggaagaaatggcatttgaaagtggcttgagctactacgacgccttcatggtg
gccgccagtgatattgtggatgagcaagtgaagaccatcgccattccgcggcgcttcacc
gccatgatacgtgaagtgtggcaattgcaaatgcgcatgacgcgtcgcaccggggcgcgt
gcgtttaaaacgttggacgagaaaaaattccgtgccgcgtttgatttgcttgagatgcgc
ggtgcggtagaaggtgaagagacagaagcgctgtgtgcgtggtggcgagactttcagcgt
gcggatcaaagtggccgccaaaaaatggtgcgtgcgatcaataaagctcataatacgcgt
aaacccaagtctcgtcgacgtaaagggccgccacgtcggcgtaaaccgcagtcaaattca
gacgcatga
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