Salinivibrio kushneri: FCN78_03450
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Entry
FCN78_03450 CDS
T05956
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
FCN78_03450
Enzymes [BR:
sks01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FCN78_03450
Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FCN78_03450
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
DUF3071
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
QCP01530
LinkDB
All DBs
Position
1:complement(713777..715354)
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AA seq
525 aa
AA seq
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MKYRFVILSTLLLSGCQSIGDAQNADIASEAPPVVAKETTRSPDKASETPKKTTPATPTV
LSPQKQNDVWQRISMQLSLPVPDNASVRRYRNWYLKYPNHLATVAERATPFLHLIVEKVE
ARNMPLELALLPVVESSFDQFAYSHGRAAGLWQFVPATGRRFGLEQNWWYDGRRDVVQST
DAALDYLEYLHGMFDGNWLHAIAAYNSGEGRVARAIRRNEQRGKPTDFWHLDLPKETSSY
VPKLIALGDVLRHQEQYGLDVPEIPNQPALTLVDPKMQMDLALAANYAGLSVSELQSLNP
AYNHWATSPSGPTHLLLPNDNVERFNSELAKNDNQGLRVERYAVKSGDSLSEIAAEYNTT
VKVLKRANQLRSSRIRVGQRLMIPVSLKDESQYTLSAPQRLAALQAAERDGHKRTHTVRQ
GDSFWTIARRYDVDYRQLAKWNGMSPRDTLSIGQKLVVWDKEGDARRIRTITYRIRQGDS
LSSIAQRYNVSVAELVKWNQLRQSAYIQPGQKLTLHIDISRSSGS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgttttgttatattgagcacgctgttgctgagcggctgtcagtctatcggc
gacgctcaaaatgcggatatcgcctccgaggcaccgcccgttgtcgcaaaagaaacaacg
cgctcgcctgataaagcctcagagacgcccaagaaaaccacacccgcgacgcctacggta
ctttccccgcaaaaacagaatgatgtgtggcagcgcatcagtatgcagctttcgcttccc
gtgcctgataatgcctcggtacgccgttatcgtaattggtacttaaagtatcctaaccac
cttgccacggtcgctgagcgcgccacgccgtttttacacctgatcgtagaaaaggtcgaa
gcgcgcaacatgcccttagagttggcgttgcttccagtcgtagaaagctcgtttgatcaa
tttgcgtactcgcatggccgggcggctggcctttggcaatttgtcccagcaacaggccgc
cgttttggcctggaacaaaattggtggtacgacggccgacgtgatgtggtgcaatcaacc
gatgcggcactcgattacctcgagtacttgcatggcatgtttgatggcaactggttacac
gctatcgctgcatataactccggcgaaggacgtgtggctcgtgctattcgtcgcaacgag
caacgcggaaagcctaccgacttttggcatttagacctccccaaagaaaccagcagctat
gtgcctaagctaatcgcccttggcgatgtactgcgccaccaagagcagtatggactcgac
gtgccagaaatccccaatcagccagcactgaccttggtcgatcctaagatgcagatggat
ctggcgctcgcggctaactatgccggtttaagtgtttctgagctccaaagccttaaccct
gcgtataatcattgggcaacgtcaccatcaggccccacccacttattgttgcccaacgac
aatgtggaacgctttaattctgaattggctaaaaatgacaaccaagggcttcgtgtggaa
cgttatgcggtgaagtcaggtgacagcctgagtgaaatcgcggctgagtacaacaccacc
gtcaaggtattaaaacgagctaaccaactccgctcctcacgtattcgcgtgggtcagcgc
ctgatgatccctgtttcgctgaaagatgaatcacaatacacgctaagcgcaccacagcgc
ctcgccgcattgcaagcggcggagcgagatggccacaagcgcacccacaccgtgcgccaa
ggcgacagtttttggacaatcgcccgccgttatgacgttgattatcgtcagctcgctaag
tggaacggcatgagtcctcgcgacaccctcagcattggccagaagttggtcgtttgggat
aaagagggagatgcacgtcgcatccgcacgattacctacagaattcgacaaggtgattcc
ttgagcagtattgcacaacgctacaatgtatcagtcgccgagctggttaaatggaaccag
ttacgacaaagcgcatatatccaacccggtcaaaagctaacactgcatatcgacatttct
cggagtagcggctcatga
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