Salinivibrio kushneri: FCN78_03705
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Entry
FCN78_03705 CDS
T05956
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03030
DNA replication
sks03430
Mismatch repair
sks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCN78_03705 (holA)
03430 Mismatch repair
FCN78_03705 (holA)
03440 Homologous recombination
FCN78_03705 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sks03032
]
FCN78_03705 (holA)
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_03705 (holA)
Enzymes [BR:
sks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCN78_03705 (holA)
DNA replication proteins [BR:
sks03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FCN78_03705 (holA)
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FCN78_03705 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
QCP03267
LinkDB
All DBs
Position
1:complement(765343..766365)
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AA seq
340 aa
AA seq
DB search
MRTYPDQLAQQLNQPLRQTYLVFGSDPLLKLEARDAIAHAARAQGFEEHHKFVIDGQLDW
QEVIDCCQALSLFASRQIIELTCPDNGLTSTQAKQLTELAAYLHPDILLLVQGERLNKKQ
ESAKWFSALAQHGLYVVCNTPEARHLPRFIEQRCRHLGLKPDQPALQLLAQWHEGNLLAL
VQSLHILQLLYPDGALTLPRIESSLSRHHHFTPFQLTDALLAGKAQRAQRILDQLRAEGE
EPTLLLRLIQKELKQLYSIQEQGQKGRPLNAIFDQFRVWQTRRPMLTAALNRLNKARLTT
LLRRLAQIEIRLKTDFGSDPWPDLQYFCALMTQASEPLTP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagaacctatcccgaccaattggcgcagcagctcaaccaaccgctgcgccaaacttat
ttggtttttggctccgacccattacttaaactcgaagcacgcgatgccattgcacacgcg
gcgcgcgcccaaggttttgaagagcatcataaatttgtcattgatggtcagctagattgg
caagaagttatcgattgctgtcaagcacttagcttgtttgcgtctcggcaaattattgaa
cttacctgccctgacaatggcctcaccagcacgcaagccaagcagcttaccgagctggcc
gcttatctgcatcctgatatcctcttattggtgcaaggggaaaggctcaacaaaaagcaa
gaaagcgccaaatggttttcagcgctcgcccaacacggcttatacgtggtgtgtaacacc
ccggaagctcgtcacttaccacgctttattgagcaacgctgtcgtcacttgggactaaag
cctgatcaacctgcgctacagctattagcacaatggcatgaaggaaacctcctcgcctta
gtgcaaagtctgcatatcttgcagctactttatcccgatggtgcactcaccttgcctcgt
attgaaagttcgctgtcacgccatcatcactttacccccttccagctcaccgatgcgctg
ctagccggtaaggcacaacgcgcgcagcggatactcgaccagcttcgcgctgaaggggaa
gagccaacacttctgttgcgactgattcaaaaagagcttaagcagctgtacagcattcaa
gagcaaggacaaaaaggcaggccgttgaatgccatctttgatcagttccgtgtgtggcaa
acccgtcgtcccatgctcacagccgctctcaatcgactcaataaagcccggttaaccaca
ctgctacgccgcttggcgcagatagaaatcaggctaaaaacggactttggtagcgatcct
tggccggatctgcagtatttttgtgcactcatgacccaagcgtccgaaccactcacgccc
tag
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