KEGG   Salinivibrio kushneri: FCN78_04505
Entry
FCN78_04505       CDS       T05956                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sks  Salinivibrio kushneri
Pathway
sks03030  DNA replication
sks03430  Mismatch repair
sks03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sks00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FCN78_04505
   03430 Mismatch repair
    FCN78_04505
   03440 Homologous recombination
    FCN78_04505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sks03032]
    FCN78_04505
   03400 DNA repair and recombination proteins [BR:sks03400]
    FCN78_04505
Enzymes [BR:sks01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FCN78_04505
DNA replication proteins [BR:sks03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FCN78_04505
DNA repair and recombination proteins [BR:sks03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FCN78_04505
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: QCP01713
LinkDB
Position
1:929171..929902
AA seq 243 aa
MLHFDLRKKEDADHVDWRAMLETKRETVQHETLQAFYQQGWVSPDTSVSQVSFVALDFET
TGLDSQQDAIVSIGLVPFTLNRIRCQHAQHWIVNPNRPLAESSIVIHGITHSDIVNAPDF
SHVIEPLLSALAGSVVVVHYRRIEREFLDRAFKQRLGEGIIFPMVDTMELEARKHRSGKR
SFMDWIARRPPESIRLADSRHRYHLPFYQSHHALTDAMATAELLQAQIAHDFSPDTPISE
LWR
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcttcatttcgatttgagaaaaaaagaggatgccgaccacgttgactggcgtgccatg
ttggaaaccaaacgtgaaacggttcagcacgagaccttgcaagcgttttatcagcaaggc
tgggtatcgcctgatacctctgtctctcaggtgtcttttgtagcgttagactttgaaacc
acaggacttgatagccagcaagatgccatcgtcagtattggcttggtgccctttaccctg
aatcgtattcgttgtcagcatgcgcaacattggattgttaaccctaatcggccgttggca
gagtcgtcgattgtgattcatggcatcacccactcggatatcgtgaatgcccctgacttt
tcgcatgtgattgagcccttactgagtgcgttggccggctccgtcgtcgtcgttcactac
cgccgtattgagcgggagtttctcgaccgcgcgttcaaacagcgtttgggggaggggatt
attttcccaatggtcgataccatggagttagaagcgcgcaaacacagaagtggtaaacgc
agtttcatggattggattgcacgccgcccgcctgagtcgattcgtttagccgacagtcgt
catcgttatcacttgcccttttatcaaagccaccatgcgctgacggatgcaatggctacc
gctgaattgctgcaagcgcaaattgctcatgacttttcaccggacacgcccatcagtgaa
ctatggcgctaa

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