Salinivibrio kushneri: FCN78_07175
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Entry
FCN78_07175 CDS
T05956
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sks01002
]
FCN78_07175
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
FCN78_07175
Peptidases and inhibitors [BR:
sks01002
]
Cysteine peptidases
Family C82
FCN78_07175
Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FCN78_07175
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QCP02194
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Position
1:complement(1513798..1515591)
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AA seq
597 aa
AA seq
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MDEEGRMVRRHDAWLANLLIGCCFWVNPGMANEAIEAGGMRLLAAPSTSAHSASDQATSV
EQTLSADDHRQRAYQYARDWLESAAPDATVLAYPSALTQDYLDNGFSLLWTQDAARDELA
TQVNVISLASFSPEFEWRAWQLRQLRQQGSDTAYDIFATDTAYALMSYLNAVPDKGMRWF
FGSLHHSPLPAPSVSQRKAVFKAGLGPSLPAFLRKLRPQHPQYTALIKQIVRLQRQARSM
WPSVNSDGLIYPDQAVTISLALNLVDNLSMQGYWGDSQRLEALDGKTVRYGGDLLDAVKR
FQSQHGLSVDGIIGPSTLKWLNLDASARIRLLALNAERLRLWSAQQPDRIVVNIPDYRMR
LWANDQNVFESKVVVGRQSRRTPLFSSRLDSVVLNPSWNVPRSIVQKDILPKLVDGHDYL
SQHQYRILPNWQSDTQIDPSSIDWQKVSVDGFPYRLQQAPGRGNALGKYKFNTPNRNAIY
LHDTPAQSLFSRSRRAFSSGCIRVEQAEQLADLLLDLSGKQLTDYQHYIDKTQTKWVPLK
RRLAVQTIYQTAWVTDDGEVTFRDDVYAYDVPAKRTITTQKPSYLTQQRHSVEMQAQ
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggggcgtatggtgagaaggcacgatgcctggttggctaaccttctgata
ggatgttgtttttgggtaaaccccggtatggcaaatgaggcgatcgaggccggtggcatg
cgactgctagcggcaccatccacctcggcgcactcggcctccgatcaggcgacgtcggtt
gagcaaactctgtcggctgacgatcatcgtcaacgcgcctatcagtatgcgcgcgactgg
ttggagtcggccgcccccgatgccactgtcttagcctatccctcagcgctgacgcaagac
tatctcgataatgggttttctctgctttggacccaggatgcggcgcgggatgagctggca
acgcaagttaatgtgatttcattggccagcttcagtcctgaatttgagtggcgtgcctgg
caacttcgccaactccgccaacagggtagcgataccgcgtatgatattttcgctactgac
acggcgtatgccttgatgagttacctgaacgcggtgcccgataaaggtatgcgctggttt
tttggctcgctgcatcactcgccattgcctgcgccctccgtgtctcagcgaaaggcggtt
tttaaagccggtttggggccgtctttgcctgcttttctgcgtaagcttcggccacagcat
ccacaatataccgcgcttattaagcagattgttcgtttacaacggcaagcccgctcaatg
tggcccagcgtgaacagcgatggattaatttaccctgaccaagcagtcacgatatctctg
gcgctcaatctcgtcgataacctaagtatgcagggttattggggggacagtcagcggttg
gaggcactggatggtaaaacggtgcgatatggcggcgatttactcgatgctgtcaaacga
tttcagtcacaacatgggctgagtgtggatggcatcattggcccatcaaccttgaaatgg
cttaatttagatgcgtcggcgcggatccggctgcttgctctcaacgcagagcggttacgc
ttgtggtcagcgcaacaaccggatcgcattgtggttaatatccctgattatcgtatgcgt
ctgtgggctaacgatcagaatgtgttcgaaagcaaggtggtggtcggtcgccaatcgaga
cgtacgcccctgttctcgtcacgactcgactctgtggtactcaatccgagctggaatgtg
ccccggagcatcgtgcaaaaagatattctacccaagctggttgatgggcacgactacctc
tctcagcatcagtaccgcattctgcccaactggcaaagtgatacccaaatagatcctagc
tcgattgattggcaaaaagtgtcagtcgacggatttccctaccgacttcagcaggcacca
ggtcgtggcaacgccctcggaaaatacaagtttaacacgcccaatcgtaacgcgatttac
ctgcatgatacgccagcgcaaagtttattcagccgatcacggcgtgcatttagttccggc
tgtatccgtgtcgagcaagcggagcaactggcggacttattactggatttatcgggtaag
cagctgaccgattatcagcactatattgataaaacccagaccaagtgggtaccactcaaa
agacgtttggcggtgcagactatttatcagacggcttgggtcacggatgacggggaggtg
acctttcgcgatgacgtgtacgcttacgatgtccccgcaaaacggacgatcaccacacaa
aagcccagttatttaacccagcagcgtcattccgtggagatgcaagcgcaatag
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