Salinivibrio kushneri: FCN78_08365
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Entry
FCN78_08365 CDS
T05956
Name
(GenBank) TIGR01621 family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sks03009
]
FCN78_08365
03016 Transfer RNA biogenesis [BR:
sks03016
]
FCN78_08365
Enzymes [BR:
sks01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FCN78_08365
5.4.99.29 23S rRNA pseudouridine746 synthase
FCN78_08365
Ribosome biogenesis [BR:
sks03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FCN78_08365
Transfer RNA biogenesis [BR:
sks03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FCN78_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF1869
AMMECR1
Motif
Other DBs
NCBI-ProteinID:
QCP03334
LinkDB
All DBs
Position
1:complement(1772834..1773502)
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AA seq
222 aa
AA seq
DB search
MFSIVDQNQHFVVINKYHGVSVQKEADHAALLPAVASHIGVEKVYLVHRLDKMTSGLLLL
ATSSHAASVLSGLFASREIEKLYLALSAKKPRKKQGLIVGDMAKGRRGSWKMLTSKDNPA
RTRFTSIAGGEGRRLFLCRPYTGKTHQIRVAMKSIGSPLIGDDYYGGEPADRGYLHAYGL
QFTCRFADDQPAKHYSYVLPPSQGELWPTLPVEWEQPWHLIS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaattgtcgaccaaaaccaacactttgtggtgatcaataagtaccacggcgtt
agcgtgcaaaaagaagccgatcacgcggcactgttgcctgcggtggcgtcgcatattggg
gttgagaaagtttaccttgtgcatcggttagacaagatgacatcgggcttgctgctgctg
gcaacctcttctcatgcggcgtctgtcctctcagggctgtttgcttcgcgcgagatagaa
aaattatatttggcattaagtgcgaaaaagccgcgtaagaagcagggtctgatcgttggg
gatatggccaaagggcggcgaggtagctggaaaatgttaaccagcaaagataacccggcg
agaacgcgttttacctctattgctggtggtgagggacggcgactttttctctgtcggccc
tacacaggcaaaacccatcaaattcgcgtggcgatgaaaagcattggatcaccgctcatc
ggtgatgattactatggcggtgagcctgccgatcgtggctacttacacgcttatgggttg
caatttacgtgtcgttttgctgatgatcagccagccaagcactacagctatgtgctgccc
ccgagccaaggcgaattgtggccaaccttaccggtggagtgggagcagccttggcactta
attagctag
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