Salinivibrio kushneri: FCN78_09080
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Entry
FCN78_09080 CDS
T05956
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
sks
Salinivibrio kushneri
Pathway
sks02020
Two-component system
sks02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCN78_09080
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCN78_09080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sks02022
]
FCN78_09080
Two-component system [BR:
sks02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
FCN78_09080
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_16
AAA_19
HTH_30
HTH_23
APS_kinase
HTH_7
OKR_DC_1_N
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QCP03344
LinkDB
All DBs
Position
1:complement(1935962..1937377)
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AA seq
471 aa
AA seq
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MVEDTASVAALYKSYLNPLDVDVTIVGTGQDAMAFFEQEGDQLALMILDLRLPDMSGIDV
LAKVRAVAPDLPVIIMTAHGSIDAAVDAMRHGANDFLIKPCEADQLRVTVNKSLKPKPSH
PGKATKQESEYHGFIGRSLPMQAVYRVIESAAPSKATVFITGESGTGKEVCAEAIHAAST
RSNKPIIALNCAAIPKDLIESELFGHVKGAFTGAASEREGAAEMANGGTLFLDEICEMDM
DLQSKLLRFIQTGSFQKVGSSQVKSVDVRFVCATNRDPWLQVQQGKFREDLYYRLHVIPL
ELPPLRERGDDVIAIANALLALFSAEEGKDFCRFSDEVTTQLLRYDWPGNVRQLQNVIRN
IVVLHNGEEVSKEMLPSPVARVSGVEIASTGDNTRSETANSALATHEPVKPASPVVMKAD
IEPLWKTEKRAIEVAIDVCNGNIPQAAGLLEVSPSTLYRKLQAWQKSAAHE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagacacagcgtcggtggcggcgttatataaatcctaccttaaccccttagat
gtggatgtcaccattgtagggacggggcaggatgcaatggcttttttcgagcaagaaggc
gaccagttagcactgatgattttagatttacgcctgccagatatgtcgggtatcgatgtg
cttgccaaagtgcgcgcggtcgcgcccgatttacccgtgattatcatgaccgctcacggt
tcgattgatgccgctgtcgatgcgatgcgtcatggtgccaatgactttttgatcaagcct
tgtgaagccgatcagttgcgtgtcacggtcaataagtcgctcaaacccaagccgagtcat
ccggggaaagcgactaaacaggaaagtgaataccacgggttcattggccgtagcttgccg
atgcaggctgtctaccgtgtgatcgaatcggccgcacccagtaaagccacggtgtttatt
accggtgaaagcgggaccggtaaagaggtgtgcgcagaagcgattcatgctgccagtaca
cgaagtaacaagccgattattgcactaaattgcgcggcgattccgaaagatttgattgaa
agtgagttatttggccatgtgaaaggagcctttacgggcgctgcgtccgagcgtgaaggg
gctgcagaaatggccaatggtggcaccttgtttttggatgaaatttgcgaaatggatatg
gatttgcaatccaaactgctacgtttcattcaaacggggagttttcaaaaggttggctct
tcgcaagtgaagtcagtggatgttcgatttgtctgtgccaccaaccgcgatccctggctc
caagtacagcaggggaaattccgggaagatctctactaccgcttgcacgtcattccactc
gagttgccacctttaagagagcgtggagacgacgtcatcgccattgccaatgcgttgctt
gctttgttttccgcggaagaaggcaaagatttttgtcgttttagtgacgaagtgaccacg
cagctccttcgctacgattggccaggcaatgttcggcagctgcaaaacgtgattcgtaac
attgtggtgttgcataacggcgaagaagtcagcaaagaaatgctaccatcgccagtcgct
cgcgtttctggtgttgaaattgcatctacaggggataacacgcgatcggaaacggcgaac
agcgcactagcgacgcacgagcccgtcaaaccagcatcaccagtggtgatgaaagccgat
atagaaccactatggaaaacggaaaaacgggcgattgaagtcgcgatcgatgtgtgtaat
ggcaatatcccgcaagcagcggggttacttgaagttagcccttcaaccttgtatcgaaag
ctacaagcttggcaaaaatctgcggcgcatgaatga
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