Salinivibrio kushneri: FCN78_10060
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Entry
FCN78_10060 CDS
T05956
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FCN78_10060 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_10060 (xseA)
Enzymes [BR:
sks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FCN78_10060 (xseA)
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FCN78_10060 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Baculo_PEP_C
Fe-ADH
DHQ_synthase
PIN_8
Prominin
Motif
Other DBs
NCBI-ProteinID:
QCP02703
LinkDB
All DBs
Position
1:2152232..2153620
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AA seq
462 aa
AA seq
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MLTSLLKGTEIVTANNRNILSVSRLNAEVRLCLEKNIGIVWLTGEISNFTAATSGHWYLS
LKDNQSQVKCAMFRGNNRRVMFKPKNGDQVLVRARVSMYEPRGDYQLILESMQPEGDGRL
QQAFEQRKQALAAEGLFAQSAKQALPDQPKRVGIITSKTGAALHDILNVLKRRDPSLPVV
IYPTLVQGQEAAVAIAQAIGRANARNECDVLIVGRGGGSLEDLWCFNEEIVARTIAASQI
PIVSAVGHEVDVTIADFVADVRAPTPSAAAELVSRDLSYRLQQYQQREQALKNAIGTLLY
RQQRALTQHEHRLSHQHPRRRLQQQSQHIDELQRRMHQALTKQFSRYSSQLNTLDTRLQR
MTPDRRIQQHQAQLAQYHQRLTHAMDSHLSHAQQRLATLVATLDAVSPLATLSRGYSISR
DSDGHIVTNINQLKEGDTLHTQLSNGDVTSVVQQRHLHQSPD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaagcttattgaaagggaccgagatcgtgaccgctaacaaccgaaatattctt
tccgtctctcgcttaaatgccgaagtgcgtctttgcttggagaaaaacatcggtatcgtc
tggctcacgggggaaatctctaattttaccgccgcgacatcgggtcactggtatttgtcg
ttgaaagataaccaaagccaagtcaaatgtgcgatgttccgtggtaacaatcgccgcgtg
atgttcaaacctaaaaacggcgatcaggtattggtacgtgcacgcgtgtctatgtacgag
cctcgcggcgactatcaactgatcttagaaagcatgcagcccgaaggcgatggacgactg
caacaggcgtttgagcaacgcaaacaagcgttagccgctgaaggcttattcgcacaaagc
gccaaacaggccttgcccgaccaacccaaacgcgttggcataatcacctccaaaacgggc
gctgccttgcacgatattctaaatgtgttgaaacggcgcgatccgagtctgcccgtggtt
atctatcccacgctggtacaaggacaagaggcggcggttgctattgcccaagccatagga
cgcgcgaatgcgcgcaacgagtgtgatgtgctgattgttggccgtggtggaggctcactc
gaggatttatggtgctttaatgaagagattgtcgcccgtactatcgccgccagtcagatc
cccatcgtcagtgccgtaggccatgaggtcgatgtcaccattgccgactttgttgccgat
gtgcgcgcgccgacgccatcagccgccgcggaattagtgagccgtgacctcagttatcgc
ttacagcaatatcagcagcgcgagcaagcacttaaaaacgcgatcggcaccctcttgtat
cgccagcaacgggcgctgacgcagcacgaacaccgtttgtcgcatcagcaccctcgccgg
cggttgcaacagcaaagtcagcatattgatgagctgcaacgacgaatgcaccaggcactc
actaagcagttttcacggtacagcagccaactgaacacgttagatactcgattgcagcgc
atgacgcctgaccgtcgtattcagcagcatcaggctcaattggcgcaataccatcaacgc
ctcacccacgcgatggactcgcacctgtcccatgcgcaacagcgactcgcgaccttggtc
gccaccttagatgcggtcagcccacttgccaccctttctcgcggctattcaattagccgt
gatagtgatggacacatcgtcactaacatcaaccagttgaaagagggtgataccttacac
acccagcttagcaacggcgatgtcaccagcgtggtacaacaacgacacctgcatcaatct
cctgattaa
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