Salinivibrio kushneri: FCN78_10275
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Entry
FCN78_10275 CDS
T05956
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_10275
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCN78_10275
Archaeal homologous recombinant proteins
FCN78_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_ATPase
ABC_tran
AAA_21
DUF87
AAA_15
DUF4972
Motif
Other DBs
NCBI-ProteinID:
QCP02746
LinkDB
All DBs
Position
1:complement(2198981..2202748)
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AA seq
1255 aa
AA seq
DB search
MKILALRGENLASIQHPFVLDFSQGPLGDSGLFAITGKTGAGKSTLLDAICLALYDKIPR
FQSNKKHDADIGLGDPTTRVKANDVRSILSRGKGEGYAEVDFVAYDGSRWRAHWSVRRAR
GKADGRIQASEHWLENLATGQRIAGKKQEVLSEIERLVGLSYEQFRRAVMLPQGDFAAFL
KASADDRAALLERMTGTEIYSRLSQMAHERARDEKQALDQLTQQLGDIQLLTDDEEQQLH
QEQAQCQQHIHDLQTQLRKLNDYRQQHTHLAQAQQGVETAQQALDEASEAREGIAARREA
LDEIERVQVARDDWQAVQTSQWQRQALTLESHQLAREEREIAQAYEQEAERWRAANRALA
EAEQYWADIEPKVREAQQIDTQLSGIERQMHDQNVALNEQQQKYRHAHQSLVHAREQAEQ
QQRREKALEQEIAQYGDFSHVAEHYQPVFDNLRQYLDCQDTLSALQEEYQARHHQQQHWQ
PQRDKLDKDIAQVDDSSAQLKAKRQALEPEALQANQDADQARYSKLHTQKQQQEAVLNEG
KNWQYWQERCQHNQAELEKHQALLADSQAHLAQLKDTLTREQAQVEEAQNSLQQAMAVVE
LDDLRQTLHEGDPCPLCGATEHPYLHHAPAIEGMIAQQQARVDALQASYNQHNAEYYYWQ
KQHQQSQHACAELREQGAVWQAERQQCEREVSAAIAELDEAIDLSRPLSDILGEIDAQAQ
QTYAEYQTCYQAMTERQQQLAHVQQMDTAIAELQHAREQRVARRHQLDQSLTECETRLNA
IDEQWQQQHAQLTRVSQSLDQQLGAGQWLASLQQVGAAHYIRQMEQKIQAYQALQDEKAA
LAEHKQQRETELATLSQQCQSLSEDIQARQAQLVVLAQEHQQQSVERQALIPQSDLEALE
REYKAAIDGQRAQRNHAEQAYTQASEKRAGVQARQQTLDTQQREADQRYRASVRRWIQWQ
PELGVHQYDLITALSYSEAWRANERQAISDVEARYQEAKTRLDERQQQLSHCQQAIADAS
AWLATQQLSEDEASLSAQQASWQQALEENEQRLFTLRHQLTESEKAKQQAGSLTEKIEGQ
RQQTEQWLKLADLIGSASGAKFRNLAQSLTLSQLVEIANEHLASLSPRYALQTVPDSLLA
LQVVDHDMGDEVRSVESLSGGESFLVSLSLALALASLAADTRQLGSLFIDEGFGTLDPDS
LEMALACLDTLQADGRQIGVISHVNTLVERIGAQVRVDSQGGGASRVMVTEQGVG
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctggcattacgtggcgagaatttggccagcattcaacatccgtttgtattg
gacttttcacaaggaccactgggtgacagtggcttatttgcgatcacaggcaagacgggc
gcgggaaagtcgacgcttttggatgcgatttgcttggcgctttacgacaagatcccgcgc
tttcagtccaataaaaaacatgatgcggatattggcttgggcgacccgaccactcgggtt
aaagccaatgatgtgcgtagtatcttatcgcgtggtaaaggcgaggggtacgcagaggtt
gattttgtcgcctatgacggcagtcgttggcgcgcacactggtcggtacgccgggcgcgg
ggcaaggcggatggccgcatacaggcgagcgagcattggttggagaacctcgccacaggc
caacgtattgccggtaaaaaacaggaagtactcagtgaaatagagcgcttagtggggctg
agctatgaacagttccgccgtgcggtgatgttgccgcaaggggattttgccgctttctta
aaagcgtctgctgatgatagagcggccttgcttgaacggatgacaggcactgagatatat
agccgactgtcgcaaatggcacacgagcgggcccgcgatgaaaagcaagcactggatcaa
ctgacccaacagttgggcgatattcagttactcacggatgatgaagaacagcaactgcac
caagagcaggcgcaatgccagcagcacattcacgatttacaaactcagctgagaaaactc
aacgactaccgccaacaacacacgcaccttgcccaagcgcagcagggtgtcgagacggct
cagcaggcgctcgatgaagcgagtgaagcgcgagaaggcattgccgcgcggcgagaggcg
ttggatgagatagagcgagtgcaagtggcgcgcgacgactggcaagcggtgcaaaccagc
cagtggcaacgccaagcgctcacactcgaaagccatcaactcgctcgcgaagagcgcgag
attgcgcaagcatatgaacaagaagccgaacgctggcgcgccgccaaccgagcattggct
gaggccgagcaatattgggcggatattgagcctaaagtgcgtgaggcgcagcaaatcgat
acgcaattgtccggcattgagcggcaaatgcacgatcaaaacgtggcgttgaatgagcag
cagcaaaagtatcgtcatgctcaccagtcactcgtccatgcgcgcgaacaagccgagcaa
cagcaacgtcgcgagaaggcgttagaacaagaaatcgcgcaatatggtgacttctcgcat
gtggcggagcactatcagccggtgttcgataacctgcgccagtacctcgattgccaagac
actctctcggcgctgcaagaagagtatcaagcccgtcatcatcagcagcaacattggcag
ccgcaacgtgacaagttggacaaagacattgcccaagtggatgacagtagtgcgcagctg
aaagccaagcgacaagcgctggagcctgaggcgctgcaggcaaatcaagacgcagatcag
gcacggtatagcaagttgcacacgcaaaagcagcagcaagaagcggtgctcaatgagggg
aaaaactggcagtattggcaagagcgctgtcagcataatcaagcggagctggaaaaacac
caagcattgcttgcggacagccaagcccatttagcccaattgaaagacacactaacccgt
gagcaggctcaggtggaggaggctcaaaacagccttcaacaagcgatggcggtggtcgag
cttgatgatcttcgccaaaccttacacgaaggggatccttgtccgctctgtggggccacc
gaacatccttatctacaccatgcccccgcgattgaaggcatgatcgcccagcagcaggcg
cgtgtagacgccttacaagcctcgtataaccagcacaatgccgaatactattattggcag
aaacagcaccagcaaagccagcacgcgtgcgccgagctgagagaacagggagctgtttgg
caggctgagcgacagcaatgcgaacgcgaggtgtctgccgcgatcgctgagctggatgaa
gccatcgacttatcacgtccactcagtgacatcctcggcgagattgacgcacaggcgcaa
caaacctatgccgagtatcaaacctgttatcaagcgatgacggagcgccaacaacagctt
gcgcacgtgcaacaaatggatacggccatcgcggaactccaacatgcacgtgagcagcga
gtggcacgacgtcatcaacttgatcagtcactgactgagtgtgagacacgactcaacgcg
attgatgagcaatggcaacagcaacacgcgcaactcacgcgcgtcagccaatcgttggat
cagcagttaggtgctgggcaatggctggcgagcctgcaacaggtgggggcggcgcattat
atccgccagatggagcaaaaaattcaggcctaccaggcgctgcaagatgaaaaagcggcg
cttgctgagcacaaacaacaaagagagaccgaactggccacgctctcgcagcagtgtcag
agcttgtcggaagatattcaagcacggcaagcgcaattggttgtgttggcgcaagagcat
caacaacaaagtgtcgagcgccaagcactgatcccgcaatcagatttagaggcgttggag
cgagaatataaagccgccatcgacgggcaacgggcgcaacgtaaccacgctgagcaggcg
tatacgcaggccagtgaaaagcgcgcgggcgtacaggcgcgccagcaaactctcgatacc
cagcagcgtgaggcggaccagcgctaccgcgcaagtgttagacgttggatccaatggcag
ccggagcttggtgttcatcagtatgatttaattaccgcactttcttacagtgaggcatgg
cgagccaatgagcgacaggctatcagcgacgttgaggcgcgttatcaagaagcaaaaaca
cgccttgatgagcgtcagcaacagcttagtcattgtcagcaggccatcgctgatgcaagt
gcttggctagcgacgcagcaactctcggaggatgaggcatcacttagcgcgcagcaagcg
agttggcaacaagcacttgaagaaaacgagcagcggctcttcaccctccgccatcaattg
acggagtcggaaaaagccaaacagcaagccggctcgctgaccgaaaaaatcgagggacag
aggcagcaaaccgagcaatggttgaaattggccgacctgataggctctgccagtggcgct
aaattccgtaatcttgcgcagtcgttaaccttgtcccagctggtcgagattgccaatgag
cacttggcgtcattgtcaccacgttatgcattgcaaacggtaccggatagcttgctggcg
ctacaagtggtcgatcatgatatgggtgatgaggtgcgcagtgtcgaatcactgtctggc
ggagagagctttttagtctcgctctcgctggcgctagcactggcctctttagcggcagat
acccgccagcttggctcattgtttattgatgagggcttcggcaccctagatcctgacagc
ttagaaatggcgctcgcctgcttggacactctgcaagcggatggccgacaaattggggtg
atttcgcatgtgaatacgctggttgaacggattggtgcgcaagtgcgcgtagatagccaa
ggtggtggcgcaagcagagtcatggtgacagagcaaggtgttggctag
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integrated database retrieval system
