Salinivibrio kushneri: FCN78_10545
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Entry
FCN78_10545 CDS
T05956
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN78_10545 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sks03019
]
FCN78_10545 (pnp)
03016 Transfer RNA biogenesis [BR:
sks03016
]
FCN78_10545 (pnp)
Enzymes [BR:
sks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FCN78_10545 (pnp)
Messenger RNA biogenesis [BR:
sks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FCN78_10545 (pnp)
Transfer RNA biogenesis [BR:
sks03016
]
Prokaryotic type
tRNA degradation factors
FCN78_10545 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
aRib
OB_RRP5_4th
KH_2
S1_RRP5
S1_2
KH-I_KHDC4-BBP
KH_SLS1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
QCP02790
LinkDB
All DBs
Position
1:2262508..2264646
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AA seq
712 aa
AA seq
DB search
MNPIVKTFQYGNHTVTLETGVMARQANGAVMVSMDDTSVFVSVVGKKEAAEGQSFFPLTV
NYQERTYAAGKIPGGFFKREGRPSESETLTARLIDRPIRPLFPDSFKNEVQVIATVVSVN
PAVSPDIVAMLGTSAALAISGIPFNGPIGSARVGYINDELVLNPSPAELDDSKLDLVVAG
TEGAVLMVESEADRLSEEQMLQAVMFGHEQQQTAINAIKEFAAEVGTPTWDWQAPEVNAA
LQTRVAEMAQGPLAQAYQITEKMARYEQIGQVKQEVVAALLGEDETLDEREILGMLGDLE
KKVVRSRIIAGEPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRD
AQTIDSIMGERQEGFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSQDDF
PYTLRVVSEITESNGSSSMASVCGTSLALMDAGVPVKKSVAGIAMGLVKEGDDFVVLSDI
LGDEDHLGDMDFKVAGTDDGVTALQMDIKIEGITKEIMQIALNQAKGARLHILDVMDQAI
GSARDDISEFAPRIHTMSINPDKIRDVIGKGGAVIRQLTEETGTTIEIDDNGTVKIAATD
GEAAKDAISRIEALTAEVEVGRIYTGKVQRIVDFGAFVSVIGGKDGLVHISQIADQRVEK
VSDYLEIGQEVDVKVLEVDRQGRIRLSMKEASAEQAPAADAAPAEEAPSTDA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaatcgtaaaaacattccagtacggcaatcatacagtgacattggaaacgggc
gtgatggcacgtcaagccaatggtgctgttatggttagcatggacgatacctcggtattc
gtttctgtggtcggtaaaaaagaagcggctgaaggccaaagcttcttcccattgacggtt
aactaccaagagcgtacctacgcggcaggtaaaatcccaggtggttttttcaagcgcgaa
ggtcgcccttctgagtcagaaaccctgaccgcacgtctgattgaccgccctatccgtccg
ctattcccggactcgttcaaaaacgaagtccaagtgattgcaaccgtcgtatctgttaac
ccagcggtgagccctgacattgttgccatgctgggtacctcggcagcactcgctatctca
ggcatcccattcaacggccccatcggctcggcgcgcgtcggttacatcaacgatgaactc
gtgcttaacccaagcccagcagagctagacgacagcaagcttgaccttgtggtcgccggt
actgaaggtgcggtactgatggtagagtctgaagcggatcgcctaagcgaagagcaaatg
ctacaagcggtgatgtttggtcatgagcaacagcaaaccgcgatcaacgcaatcaaagaa
tttgccgccgaagtgggaacgcctacttgggattggcaagcgccagaagtgaacgctgcg
ctacaaacccgtgtggctgaaatggcacaaggcccattggctcaggcataccaaatcact
gaaaaaatggctcgttacgagcagattggtcaagtgaaacaggaagtagtggctgcacta
ctcggcgaagacgagaccttggatgagcgtgaaatcctaggcatgctcggcgacttggaa
aagaaagtcgtacgcagccgcatcattgccggtgaaccacgtattgatggccgtgagaaa
gacatggttcgcgccctcgacgtgcgtacgggcgtattaccacgtacacacggcagcgcc
ttgtttacccgtggtgaaacgcaagcgctagtcaccgcgacattgggtactcagcgtgac
gcgcaaaccattgattctatcatgggtgagcgtcaagaaggcttcatgctgcactacaac
ttccctccttattgtgtgggtgaaaccggttttgttggctcaccaaagcgccgcgaaatc
ggccatggtcgcctagccaaacgcggtattgctgctgtgatgccaagccaggacgacttc
ccgtacacactgcgtgtggtctctgagatcaccgaatccaacggctcttcctcaatggca
tctgtctgcggcacatcgcttgcgctgatggatgccggtgtaccggtgaaaaaatccgta
gccggtatcgccatgggtctggtgaaagaaggcgacgatttcgttgtgctttccgacatc
ttaggtgatgaagatcatctcggtgatatggactttaaagtggccggtacggatgacggt
gtcactgctttgcagatggacatcaaaatcgaagggatcactaaagagatcatgcaaatc
gcattgaaccaagctaaaggcgcacgtttacacatcctcgatgtgatggatcaagccatc
ggctcggcacgcgacgatatctctgagttcgcgcctcgtatccacaccatgagcatcaac
ccagataagatccgcgatgtcattggtaaaggtggcgccgtgatccgtcagcttaccgaa
gaaactggcaccaccattgaaatcgacgacaacggcacagtgaaaattgcggccaccgac
ggtgaagctgccaaagatgccatttcacgcatcgaagcactcactgcagaagtcgaagtg
ggccgtatctataccggtaaggttcagcgtatcgttgacttcggtgccttcgtctcagtg
attggcggcaaagatggtctggttcacatttctcaaatcgctgatcaacgcgttgagaag
gtgtctgattatctcgaaatcggccaagaggtagacgtgaaagtgctggaagttgaccgt
caaggtcgcatccgcttgagcatgaaagaagcgtcggcagaacaagcccccgccgctgat
gctgcaccagcagaagaagcaccaagcactgacgcttaa
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