Salinivibrio kushneri: FCN78_10950
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Entry
FCN78_10950 CDS
T05956
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sks03009
]
FCN78_10950 (srmB)
Enzymes [BR:
sks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FCN78_10950 (srmB)
Ribosome biogenesis [BR:
sks03009
]
Prokaryotic type
rRNA helicases
FCN78_10950 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
AAA_22
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QCP02866
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All DBs
Position
1:2370070..2371293
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AA seq
407 aa
AA seq
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MRSFAELELDPELLSALDDMGYQRPTLIQSEVIPHGMDGRDILASAPTGTGKTAAFLLPM
LQHLLDFPRQKPGPGRVLVLTPTRELAIQVADEARALAKNTSLKIFTITGGISYQEHAEQ
LGKTQDIVVATPGRLMEYIEAERFDCRAVECLILDEADRMLDMGFANAVNRLSDECQRRR
QTMLFSATLEGRGVAGFTDNLLDNPELVDVTPPRRERKKITQWYHRCDDLEHKRALLKSI
VTEQAERAIVFIKTRERLAELRDYMQSQQLDCAWIQGEMQQAKRNNAINRFSEGKVKVLL
ATDVAARGIDVPDITHVINYDLPRTADVYLHRIGRTARAGKKGSAISLVEAHDQPMMDRI
TRYMDEEIKERTIDGLKPKHKKAEHKKKKKKQSVKNSSKVKKPKKRK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaagctttgccgaactcgagctggatccagaactgctcagtgcacttgacgatatg
ggctatcagcgccctacgctgatccaatctgaggttatcccccacggtatggatggacgt
gacatccttgcctccgccccaacgggaaccggcaaaacggcggcttttttgctgcccatg
ttgcagcacttactcgactttccgcggcaaaaacccgggccaggtcgcgtactggttctc
acccccacgcgtgagttagccattcaggtggctgatgaagcgcgcgcattagcgaaaaat
accagtcttaagatcttcaccatcaccggcgggatttcataccaagagcacgcggagcag
ctgggtaaaacacaggatattgtggtggcaacgcctggccgtttgatggagtacattgaa
gctgagcgattcgattgccgcgccgttgaatgcctgatcttagatgaagcagaccggatg
ctcgatatggggtttgcgaatgcggtcaaccgactctctgatgagtgtcaacgccgacgt
cagaccatgctgttctcagccacattagaagggcgcggtgtggcaggctttactgataat
ctgctagataaccctgaattggtggatgtgacaccaccgcgccgcgagcgtaaaaaaatc
acccagtggtatcaccgctgtgatgatttggagcataaacgcgccttgcttaaatccatt
gttaccgaacaggcagagcgcgcgattgtatttattaaaacacgtgaacgcttggcggag
cttcgtgactatatgcagtcacaacaactggattgcgcctggatccaaggtgaaatgcaa
caagcgaaacgtaacaatgccattaaccggtttagcgaaggaaaagtgaaggtcctactg
gccacggatgtcgcggcacgcggcattgatgttccagatattacccatgtgatcaactat
gatctcccgcgcacggctgatgtctatctgcaccgtattggtcgcacggcgcgcgcaggc
aagaaaggctctgccatttcactggtcgaagcccatgatcaaccgatgatggataggatc
acgcgctacatggatgaagagattaaagagcgaaccattgatggcttgaagcctaaacat
aaaaaagcagagcacaagaagaaaaaaaagaagcaaagcgttaaaaactcgagcaaagtc
aaaaagccaaaaaaacgcaaatag
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