Salinivibrio kushneri: FCN78_11840
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Entry
FCN78_11840 CDS
T05956
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sks
Salinivibrio kushneri
Pathway
sks03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FCN78_11840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sks03019
]
FCN78_11840
03009 Ribosome biogenesis [BR:
sks03009
]
FCN78_11840
Messenger RNA biogenesis [BR:
sks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FCN78_11840
Ribosome biogenesis [BR:
sks03009
]
Eukaryotic type
Pre-60S particles
RNases
FCN78_11840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCP03023
LinkDB
All DBs
Position
1:complement(2569940..2570485)
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AA seq
181 aa
AA seq
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MAFSENNLIWIDLEMTGLDPDTHKIIEIATVVTDAQLNILAEGPVLAIHQPQSELDKMDD
WCTRTHSQSGLVARVQQSDIDEQTAIEQTIAFLSQWVPSGASPICGNSVGQDRRFLYRHM
PALERYFHYRTVDVSTLKELVRRWQPEVLNDFSKQGTHLALDDIRESIAELRFYRERILT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagtgaaaacaatttaatctggattgatctggaaatgacagggctagatccg
gatacccataagatcattgagatcgcgaccgttgtgacggacgcacagttgaatattctg
gcggaagggcccgtgctggcgatacatcaaccgcaaagtgagctcgacaaaatggatgat
tggtgcacgcgaacgcatagccagtctggcttagtggcgcgcgtacaacagagtgatatt
gatgaacaaaccgccattgagcaaaccatcgcattcttatcgcaatgggtaccgtctggc
gcgtcaccgatttgcggtaatagtgtgggacaggatcggcgcttcctctaccgacacatg
ccagcacttgagcgctattttcattaccgcaccgtggatgtgagcacgttaaaagagctg
gtacgtcgatggcaaccagaggtgttgaatgatttctctaaacagggaacccatttagcg
cttgacgacatccgagaatcaattgcagaattacgcttctatcgcgagaggatcttaacg
atctga
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