Salinivibrio kushneri: FCN78_12630
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Entry
FCN78_12630 CDS
T05956
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03420
Nucleotide excision repair
sks03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FCN78_12630 (uvrD)
03430 Mismatch repair
FCN78_12630 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_12630 (uvrD)
Enzymes [BR:
sks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCN78_12630 (uvrD)
DNA repair and recombination proteins [BR:
sks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCN78_12630 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FCN78_12630 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
OSTbeta
SseB_C
Motif
Other DBs
NCBI-ProteinID:
QCP03157
LinkDB
All DBs
Position
1:complement(2748060..2750240)
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AA seq
726 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPLGNHLVLAGAGSGKTRVLVHRMAWLMRVEEASPFSVMAV
TFTNKAAAEMRGRIEQLMQGTASGMWCGTFHGICHRILRAHYLDANLPQDFQILDSDDQQ
RLLRRLIKAQNLDEKHWPAKQASWYINGKKDEGLRPKHIDTRHDPVESTWLRIYQAYQEA
CDRAGLVDFAEILLRTLELLRDKAVIREHYQARFQHILVDEFQDTNNIQYAWLRMMAGQQ
AHVMIVGDDDQSIYGWRGAKVENIQRFLDDFTTPQTIRLEQNYRSTSTILQAANTLIENN
ADRMGKSLWTEGKEGEPISVYAGFNELDEARFVVGKIKTWQDEGGALTDSAILYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPTRGIGD
RTLETLRGAARDRGQTLWHTAEQILAEKALAGRAANALGRFIELVNALEDDTRDMALYQQ
TDAVIRHSGLRAMYEQEKGEKAQARVDNLEELVTATRQFTPPEEAEAEGMTPLSAFLAHA
ALEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRL
CYVGMTRAMEKLYLTYAEMRRVYGKDMFHKISRFIRELPEACLEEVRMRANVSRPAASGG
RFSKTQTQENFNQTGFSLGQRVQHPKFGEGTIINFEGSGGQSRVQVAFNGEGIKWLVTQY
AKLEAL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcaactcttcttgacggactcaacgacaaacagcgtgacgccgtggccgcg
ccgcttggtaaccatttagtgcttgccggggccggtagtggtaaaacccgtgtgctggtt
catcgtatggcttggctgatgcgggtggaagaggcgtcgccgttctcggtgatggcggtg
accttcaccaacaaagctgcagccgaaatgcgtggccgtattgagcaattgatgcaaggc
acggcctctggcatgtggtgtggtaccttccacggtatttgccatcgtattctccgtgcc
cactatttagacgccaacctgccacaagacttccaaattcttgattcagacgatcagcag
cgcttgctacgccggttaattaaagcgcaaaacttggatgaaaaacactggcctgccaag
caagcgagttggtatatcaatggcaaaaaagacgaaggcttgcgtcccaagcacattgat
acccgccatgatccggttgaaagcacttggctgcggatttatcaggcgtatcaagaagcc
tgtgatcgcgccggcttggtggattttgccgagatcttgctgcgaaccttagagttattg
cgcgataaagcagtgatccgtgaacactatcaagcacgtttccagcacattttggtggat
gagtttcaagataccaacaacatccaatatgcgtggctgcgtatgatggctggccaacag
gcgcatgtaatgattgtgggggacgacgaccaatctatttacggctggcgtggcgcgaaa
gtcgagaatattcagcgttttctggacgatttcactaccccgcagaccattcgtttggag
caaaactaccgctcaaccagtacgattttgcaagcggccaacaccctgattgaaaacaat
gccgaccggatgggcaaaagcttgtggaccgagggcaaagagggtgagcccatctctgtg
tatgccggttttaatgaactggatgaagcgcggtttgtggtcgggaaaatcaaaacctgg
caagacgaaggcggcgcactcactgatagcgccattttataccgcaacaacgcccaatct
cgggtgctggaagaagccttaattcaagccggcctgccttatcgtatctacggcggcatg
cgctttttcgaacgccaagaaatcaaagatgcgctggcgtatttacgtttgatggcgaat
cgcaatgacgatgcggcgtttgagcgggtagtgaacacgcccactcgagggattggtgat
cgtacccttgagacgcttcgtggcgcggcgcgcgatcgcggccaaaccttgtggcacact
gccgagcaaattttggcagaaaaagcgttggcaggacgcgcggccaatgcgttgggccgg
tttatcgagttggtcaatgcgctagaagatgacacccgtgacatggcgctgtatcaacag
accgatgccgtgatccgtcactccggcttgcgcgccatgtacgagcaagaaaaaggcgaa
aaagcgcaagcacgtgtcgataacttggaagagttggtgacggccacgcgccaatttacg
ccgcctgaagaggcggaagcggaaggtatgacaccgctgtcggcgttcttggcccacgcc
gcccttgaggccggtgaaggccaagcggacgagtttgatgatgcggtccaattgatgacc
ttgcacagtgccaaaggcctcgagttccccttagtctttatggtcggggtagaagagggc
atgttccccagtcagatgtcagccgaagaagcgggtcgcttagaagaagagcgtcgcctt
tgctatgtcggtatgacgcgagcgatggaaaaactctatctcacctacgcagaaatgcgc
cgtgtgtacggcaaagacatgttccataagatctcgcgctttattcgtgagctgcccgag
gcctgcttggaagaagtgcgcatgcgtgccaatgtctcacgccctgctgcaagcggtggt
cgtttttccaaaacgcagactcaagagaactttaaccaaaccggatttagtttgggtcag
cgggttcaacaccctaagtttggtgaaggcaccatcatcaactttgaaggcagtggcgga
caaagccgcgtgcaagttgcctttaatggggaagggattaagtggttggtgactcagtat
gctaaactggaagcgctttaa
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