Salinivibrio kushneri: FCN78_12670
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Entry
FCN78_12670 CDS
T05956
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sks
Salinivibrio kushneri
Pathway
sks00300
Lysine biosynthesis
sks00470
D-Amino acid metabolism
sks01100
Metabolic pathways
sks01110
Biosynthesis of secondary metabolites
sks01120
Microbial metabolism in diverse environments
sks01230
Biosynthesis of amino acids
Module
sks_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCN78_12670 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCN78_12670 (dapF)
Enzymes [BR:
sks01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FCN78_12670 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QCP03162
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All DBs
Position
1:complement(2755213..2756043)
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AA seq
276 aa
AA seq
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MQVQFAKMHGLGNDFMVVDCVTQNAFFSPDLIRRLADRQRGVGFDQLLVVEPPYDPETDF
HYRIFNPDASEVSQCGNGARCFARFVRMKGLTNKHQISVSTQAGKMLLHIENDNQVRVNM
GEPVFTPGKIPFRANSQEKTYLMRVAEQTLFVGAVSMGNPHVVTVVEDVDHADVDTLGPL
LESHERFPERVNAGFMQILSRNAIKLRVYERGAGETQACGSGACAAVAVGIMQGVLDDQV
TVSLPGGDLRIRWRGPGHPLSMTGPATHVFDGQWQL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacagtttgcaaaaatgcacggactgggcaacgacttcatggtggttgactgt
gtgacgcaaaacgcgtttttttcgccggatctgattcggcgtttggctgatcgccagcgt
ggcgtcgggtttgaccagctattggtcgtggagccgccttacgatcccgagacggatttc
cactatcgcatttttaaccctgacgcatcggaagtctcgcaatgcggaaacggtgcgcgc
tgctttgcgcgctttgtgcgaatgaaaggcctgactaataagcatcagatcagcgtgagc
acccaagcgggtaaaatgctgctgcacattgaaaacgacaatcaggtacgcgtgaacatg
ggcgagccggtcttcacaccggggaaaattccgtttcgtgctaactcacaagagaaaacc
tacttgatgcgggtggcggaacagaccttgtttgttggtgccgtgagcatggggaacccg
catgtggtgactgtggttgaggatgtcgaccacgctgacgtggacaccttggggccgtta
cttgaaagtcacgaacgcttccctgagcgggtcaatgctggctttatgcagatcctgtcg
cgtaatgcgattaagcttagagtgtacgagcgcggcgccggcgaaacccaggcctgtggc
agtggcgcgtgtgccgccgttgccgtcgggatcatgcaaggcgtgcttgatgatcaagtg
acggtaagtttacccggtggagatttacgcattcgctggcgtgggccgggtcacccttta
tcaatgacaggcccagcgacacatgtatttgatggacaatggcaattatga
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