Salinivibrio kushneri: FCN78_13530
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Entry
FCN78_13530 CDS
T05956
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_13530 (phrB)
Enzymes [BR:
sks01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FCN78_13530 (phrB)
DNA repair and recombination proteins [BR:
sks03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FCN78_13530 (phrB)
Prokaryotic type
FCN78_13530 (phrB)
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CBM53
Motif
Other DBs
NCBI-ProteinID:
QCP03459
LinkDB
All DBs
Position
2:complement(95557..96999)
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AA seq
480 aa
AA seq
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MHLVWFRRDLRGLDNRALSAASDASEPVVGIFIETPEQWASHHLSPKQAGLIKARLDALR
EELSAKNIPLVVERAADFPQSAEKVADYAHRIGATAVFANKEYELNESKRDEQACAALAD
KGIAWYAYDDRNLFAPGTIKSGKGEPYKVFTPFKKACLRALDGMDVSPCQKPSKRETNSA
VDAIFSQLQPIHFDYPMEDVSDWASDEKGILAHMRRYCREQVADYKRQRDFPAVDATSQL
SPYLAIGALSPRQCLARLQEEQADWREPDTGAATWLSELIWRDFYQEVSAQNPAISKKYS
FLAWGESVVWDNDPTLFEAWKTGKTGFPIVDAAMHQLNQTGWMHNRLRMIVASFLTKDLL
IDWRWGEDYFMSKLIDGDFASNNGGWQWSASVGTDAQPYFRIFNPTTQGERFDSDGRFIR
RWLPALKEVPGKHIHNPWQWADKYAQSLDYPRPVVDHATQRKKALAIFEAAKNQPQEQTP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcatctagtctggtttcggcgcgatttacgcgggctggataatcgtgcgttgagcgca
gccagcgacgcgtccgagcccgtggtggggatttttattgagacaccggaacagtgggca
tcgcaccacctttcgcccaagcaagcgggccttattaaggcgcggctagacgcgttacgt
gaggagcttagcgcgaaaaatattcctttagtggtggagcgtgcggctgattttcctcaa
tcggcagaaaaagtggccgactatgcgcaccgcattggcgcaacagcggtgtttgccaac
aaggagtacgagcttaatgaaagcaagcgtgatgaacaggcgtgcgcggcgttagcggat
aaaggcatcgcatggtatgcctatgatgaccgcaatttatttgccccgggcaccataaaa
tcgggaaaaggtgaaccgtataaggtgtttactcccttcaaaaaagcctgcttacgtgcc
ctagacggcatggatgtttcaccgtgccaaaaaccatccaagcgcgagacaaactcagcc
gttgacgcgatcttttcacagcttcaaccgattcattttgattatccgatggaggatgtc
tcggactgggcgtccgatgagaaagggatcctcgcgcacatgcgtcgttactgccgcgag
caagtggcggattataaacgacagcgtgactttccggcggttgatgccaccagtcagctt
tctccttatttggccattggcgcattatccccgcgtcaatgcttggcgcgtttacaagaa
gagcaagccgattggcgcgagcccgatacaggggctgccacctggctgtcggagcttatt
tggcgtgatttttatcaggaagtgagcgcacaaaacccagcaatcagcaaaaagtacagc
tttttagcctggggcgaatccgtggtatgggataacgacccgacattgtttgaggcttgg
aagacgggaaaaacgggcttccccattgtggatgcggccatgcaccagcttaatcaaacg
ggttggatgcataaccggttgagaatgattgtggcgagctttttgaccaaagatctgctt
atcgattggcgctggggagaagattacttcatgtccaaactgattgatggcgattttgcc
tcgaacaacgggggctggcaatggtctgcgtcggtggggaccgatgctcaaccttacttt
cggatctttaatccgaccacacagggagagcgatttgatagcgatgggcgctttattcgt
cgctggttaccggcgcttaaagaggtgccaggcaagcatattcacaacccctggcagtgg
gcggataagtatgcccagtcccttgattatccgcgtccggtggtggatcacgccactcag
cgtaaaaaggcgctagccatatttgaagcggcgaagaatcagcctcaggagcaaacacca
tga
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