Salinivibrio kushneri: FCN78_14080
Help
Entry
FCN78_14080 CDS
T05956
Name
(GenBank) LacI family transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
sks
Salinivibrio kushneri
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sks03000
]
FCN78_14080
Transcription factors [BR:
sks03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FCN78_14080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_AraC
HTH_38
HTH_23
HTH_26
HTH_Tnp_ISL3
HTH_IclR
Sigma54_DBD
MarR_2
UPF0181
DUF3562
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QCP03557
LinkDB
All DBs
Position
2:211919..212911
Genome browser
AA seq
330 aa
AA seq
DB search
MASLNDVARLAGVSKSTVSRVINQEYGVKPATIEKVNRAIEQCGYVVNQIAKDLKSSKTN
LIGVIVPRVSSHAMSASVDGLSHVFDQKGKQVLLANTRQDDARICHYLDLFNQKRVEGIL
LFASTLNPTVVQAIKRSSAPVVVIGQDGSPYNIPSVIHDDYRVGFCAGEQLIKAGCQQVG
FLGVQAEDIAVDQQRYQGLESALTTLSQTAPLFHYQGQFSIQSGYVAMTAMLAQYPDLDG
VFCATDRIAIGAIQALQAQGITPGQAVKLMGVGDDELAQVVSPSLSTFNYAFDAAGESGA
KMLLELLETGQSHVSKLVMGFNYISRATCP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttgaatgatgtcgcccgtttagcgggtgtttccaaatccactgtgtcgcgt
gtaattaaccaagagtatggcgtaaaacccgcgacgattgagaaggtgaatcgcgccatt
gagcaatgcggctatgtggtcaaccaaatcgctaaggatttaaaatccagtaaaaccaat
ctcattggcgtgattgtgccgcgtgtttcctcacatgcgatgtcagctagtgtcgatggt
cttagccatgtgtttgatcaaaaagggaaacaagtgcttctggccaatactcggcaagat
gacgcccgtatttgtcattaccttgatttgttcaatcaaaaacgggtcgaggggattttg
ctgtttgcttctacgctcaaccctaccgtggtgcaagcgattaagcgctcgagtgcgccg
gtggtggtgattggtcaagacggctcaccctataacatccccagcgtgatccatgatgat
taccgggtgggcttttgtgccggcgagcagcttattaaagccgggtgccaacaggtgggc
tttctgggggtacaagcggaagatattgcggttgatcagcagcgttatcaaggccttgag
agcgccttgaccacacttagtcaaacggctcccttgttccattatcaaggccagttctcg
attcaatcgggctatgtcgccatgaccgctatgctagcgcaatatcctgatcttgacggc
gtattttgtgccaccgaccgaattgcaattggcgctatccaagccttgcaagcacaaggg
attacgccaggacaagccgtgaagctaatgggagtgggcgatgatgagcttgcccaagtg
gtatcgccaagcttatctacgtttaactatgcctttgatgcagcaggagaaagtggtgcc
aaaatgctgctcgagttgctggaaaccggacaaagccatgtatccaaattggtgatgggc
tttaactatattagccgcgctacctgcccttaa
DBGET
integrated database retrieval system
