Salinivibrio kushneri: FCN78_15780
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Entry
FCN78_15780 CDS
T05956
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sks
Salinivibrio kushneri
Pathway
sks01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
FCN78_15780
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sks01002
]
FCN78_15780
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
FCN78_15780
Peptidases and inhibitors [BR:
sks01002
]
Cysteine peptidases
Family C82
FCN78_15780
Peptidoglycan biosynthesis and degradation proteins [BR:
sks01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FCN78_15780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
QCP03903
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All DBs
Position
2:589933..590931
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AA seq
332 aa
AA seq
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MLWALAVPTAFATPYPLPTDGSRLVGYPEAHIVKEGEHLEAIAKHYDVGFLALLALNPGM
DPYLPEPGALVRLPNQLLLPSPPHSGIVINLAELRLYYFPEPAARAGGETTDAQRAVHVF
PIGIGRVGRETPTMNTYISQKREHPTWTPPQSIREEYKKQRGIILPDVVPAGPNNPLGEH
ALRLGFGNGEYLIHGTNKSFGIGLRVSAGCIRLRPDDVAWLFEQVDVHTPVRVINQPAKL
SVEPDGRVMVEAHRPLSKNEKETKARLSIEPDPQVLAMLARLELSPQRYRAALSVQEGVP
IEIATLTPAQLKAWQRLERADVDVKPVRRTKE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctttgggcgttagcggtgccaacagcgtttgccaccccgtatccgttacccaccgac
ggcagtcgactggttggctatccagaggcgcacatcgtcaaagagggcgagcacttagaa
gccattgccaaacactatgatgtggggtttctagcgcttttagcgctcaacccaggaatg
gatccctacttgcctgagcccggcgctttggtgcgcttacccaatcagctcttgctgccc
tcaccgcctcactcggggatcgtgattaatcttgccgagttacgcctttactatttccct
gagccagccgctagagcaggaggggaaacaacagacgctcaacgtgctgttcatgtattc
cccatcgggattggtagagtggggcgcgaaacccccaccatgaacacctatattagccaa
aagcgcgaacatccgacgtggacgccaccgcagagcattcgtgaggaatataaaaaacag
cgcggcatcattttgcctgatgtggtgccggcaggaccaaacaaccccttaggtgagcat
gcgctaaggttgggcttcggtaacggtgagtatttaattcatggcacgaataagtcgttt
ggtattgggctgcgagtcagcgcgggctgtatccgacttcgtcctgacgatgtggcatgg
ctgtttgagcaagtggatgttcatactcccgtgagggtgattaatcaacccgcgaagcta
agcgttgagcctgatgggcgcgtgatggtagaagcccatcgtcctttgtcaaaaaatgaa
aaagagaccaaagcgcgtttgtcgattgagcctgatcctcaggtgttagcgatgttagcg
cgattggaattgtcacctcagcggtaccgagcggcgttatcggttcaggaaggcgtgccg
atagagatcgcgacactgaccccagcacagttgaaagcctggcagcgtctcgagcgtgcg
gacgtagatgtcaagccagtgaggcgaacgaaggagtaa
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