Skermanella cutis: IGS68_00190
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Entry
IGS68_00190 CDS
T07020
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
IGS68_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQP89749
LinkDB
All DBs
Position
complement(44162..47293)
Genome browser
AA seq
1043 aa
AA seq
DB search
MIAWFARHPTAANLLMLFLLVIGLVTAPGLRRETFPDFTLSQVQIQIPYPGASAEEVEEA
VCQRIEDAVAGVSGVDEVRCESREGLAAAIVDMVEGGNPDRFLEDVKAEVEAITTFPDLV
ERPVIKRLNLTDRVVSIAITGPMSVPHLKIYAEGVRERLLRLPEVSEATLTGFSQRQIRV
ELDQGALRAHGLSVADVAGIVGRQSLDQPAGTLETEERSLTVRFADERRTVRQLADLVVI
GGTGGGEVRLGAIATITERFELDEAKTLYDGKRAAMLRVTKTKREDTLRVMAAVRGFIEQ
ERRTAPPGVGYALTQDVSSIVQDRLDMLTGNAFQGIALVFLSMWLFFSLRYSFWVAMGLP
VALAGTVFAMQFMGLSINMITMVSLLIALGLLMDDAIVIAENVATKLAAGLPPMEAVIDG
TREVASGVFASYVTTVCVFGPLILMQGDIGKVMAVLPVVLIVALTVSIVEAFLILPHHLA
KSIPPGGERRNAVRVRLDRGFDFVRDRLLGGLVDRAVEWRYLTLGLVICAVLVSAAMLAG
GIVKFRAFPQIDGNVLEARILLPQGTPLARTEEVVDRVTGALDRVAAELAPRQPDGAALV
RAVTVRFNENQDAYETGPHLASVSADLLTAERRDGTIDEITALWRAEIGPLPDVLALTFK
EAQVGPGGLPIDIRLAGGDLDRLKAASLELQDWLARYRGVEDLSDDLRPGKPEMGLRLRE
GIFGQGLDSADLATQLRAAYFGQTAAELQVGSESIEIDVRLAAADRTTLADLEDFPVTLP
DGSQAPLRSIAVLEPDRGYARIGRIDGRRTVIVRGEIDTRIANANEVIADTRARFLPGLR
DRYPEIDITLEGQEREQGKTGDSLKRGFMIGLFGIFVLLSLQFRSYVEPVIVMVAIPMAL
IGVVWGHWLAGFDVSMPSMIGFVSLAGIVVNDSILLVEFVKLRAREGRDVVSAARIASRQ
RFRAVLLTSLTTIAGLLPLLAERSLQAQVLQPLVVSLVFGLLASTVLVLVVIPSLYAILH
DFGLTALAREDREAAAAAMAAAE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcctggttcgcccgccacccgaccgccgccaacctgctgatgctgttcctgctg
gtgatcgggctggtgacggcgccggggctgcggcgggagaccttccccgacttcaccctc
agccaggtgcagatccagatcccctaccccggcgccagcgcggaggaggtcgaggaggcc
gtctgccagcgcatcgaggacgcggtcgccggcgtcagcggcgtggacgaggtccgctgc
gaatcgcgcgaggggctggccgccgccatcgtcgacatggtcgagggcggcaatcccgac
cgcttcctggaggatgtcaaggccgaggtcgaggcgatcaccaccttccccgacctggtc
gagcggcccgtgatcaagcggctcaacctgaccgaccgggtggtgtcgatcgccatcacc
ggcccgatgtcggtgccccacctgaaaatctacgccgagggcgtgcgcgagcgcctgctg
cgcctgccggaggtgtcggaagcgacgctgaccggcttttcccagcgccagatccgggtc
gaactggaccagggcgcgctgcgcgcccatgggctgagcgtcgccgacgtcgccggcatc
gtcgggcgccagagcctggaccagccggccggcaccctggagacggaggagcgcagcctg
accgtccgcttcgccgacgagcggcggaccgtgcgccagctggccgacctcgtcgtgatc
ggcgggaccggcggcggggaggtgcggctcggcgccatcgcgacgatcacggaacggttc
gagctggacgaggccaagaccctgtacgacggcaagcgcgccgccatgctccgcgtgacc
aagaccaagcgggaggacacgctgcgggtcatggccgcggtccggggattcatcgagcag
gagcggcgcacggcaccgccgggcgtcggctacgcgctgacccaggacgtctcctcgatc
gtgcaggaccggctggacatgctgaccgggaacgccttccaggggatcgcgctggtcttc
ctgtcgatgtggctgttcttcagcctgcgctattccttctgggtcgccatgggcctgccg
gtggcgctggccggcaccgtcttcgccatgcagttcatgggcctgtcgatcaacatgatc
accatggtgagcctgctgatcgcgctgggcctgctgatggacgacgccatcgtgatcgcc
gagaacgtggcgaccaagctggccgccgggctgccgccgatggaggcggtgatcgacggc
acgcgcgaggtcgcgtcgggcgtcttcgcctcctacgtgaccacggtctgcgtgttcggg
ccattgatcctgatgcagggcgacatcggcaaggtgatggcggtcctgccggtggtgctc
atcgtcgcgttgacggtcagcatcgtcgaggccttcctgatcctgccccaccatctggcg
aagagcatcccgcccggcggcgagcggcggaacgcggtgcgggtgcggctcgaccgcggg
ttcgacttcgtgcgcgaccggctgctcggcggcctggtggaccgggcggtggagtggcgc
tacctgaccctggggctggtcatctgcgcggtgctggtatccgccgccatgctggccggc
ggcatcgtcaagttccgggccttcccgcagatcgacggcaacgtgctggaggcgcgcatc
ctgctgccccagggcacgccgctggcccggacggaggaggtggtggaccgggtgaccggt
gcgctcgaccgcgtcgccgcggagctcgccccgcgccagcccgacggcgccgccctggtg
cgggcggtgaccgtgcgcttcaacgagaaccaggacgcgtacgagaccgggccgcacctc
gcctcggtctccgccgacctgctcaccgccgagcggcgggacggcacgatcgacgagatc
accgccctgtggcgggccgagatcggccccctgcccgacgtgctggcgctgaccttcaag
gaggcgcaggtcggccccggcggcctgccgatcgacataaggctggccggcggcgacctg
gaccggctgaaggcggcgtcgctggagcttcaggactggctggcccgctaccggggggtc
gaggacctgtccgacgacctgcgccccggcaagccggagatggggctccgcctgcgcgag
ggcatcttcggccaggggctggactcggcggatctggcgacccagctccgggccgcctat
ttcggccagaccgcggcggagctccaggtcggcagcgagtcgatcgagatcgacgtccgg
ctggccgcggccgaccggaccacgctggccgacctcgaggatttcccggtcaccctgccc
gacggaagccaggcgccgctgcgctcgatcgcggtgctggagccggaccgcggctatgcc
cggatcggccggatcgacggccggcgcaccgtgatcgtccggggcgagatcgacacccgg
atcgccaacgccaacgaggtgatcgccgacacccgcgcccgcttcctgcccgggctgcgc
gaccgctacccggagatcgacatcacgctggagggccaggaacgcgagcagggcaagacc
ggcgacagcctcaagcgcggcttcatgatcggcctgttcggcatcttcgtgctgctgagc
ctgcagttccgcagctatgtcgagccggtcatcgtcatggtcgcgatcccgatggcgctg
atcggcgtggtctggggacactggctggccggcttcgacgtgtccatgccgagcatgatc
ggcttcgtctcgctggccggcatcgtggtcaacgactcgatcctgctggtcgagttcgtc
aagctgcgcgcgcgcgagggacgcgacgtcgtgtcggccgcccggatcgccagccgccag
cgcttccgcgccgtgctgctgacctcgctgaccaccatcgccgggctgctgccgctgctg
gccgagcgaagcctccaggcccaggtgctccagccgctggtggtcagcctggtgttcggc
ctgctggcgtccaccgtgctggtgctggtggtgatcccgtcgctctacgcgatcctgcac
gatttcggcctgaccgcgctcgcccgggaagaccgcgaggcggccgccgcggcgatggcg
gcggccgagtga
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