Skermanella sp. TT6: IGS68_00910
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Entry
IGS68_00910 CDS
T07020
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
skt
Skermanella sp. TT6
Pathway
skt03030
DNA replication
skt03430
Mismatch repair
skt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IGS68_00910
03430 Mismatch repair
IGS68_00910
03440 Homologous recombination
IGS68_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skt03032
]
IGS68_00910
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_00910
Enzymes [BR:
skt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IGS68_00910
DNA replication proteins [BR:
skt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IGS68_00910
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IGS68_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QQP89874
LinkDB
All DBs
Position
202605..203504
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AA seq
299 aa
AA seq
DB search
MTPAEMAAALEDTGRYRVFDVYRQTDGYGDLPPDATVCRLLYIDTETTGLEHDAEIIELA
AVQVEYDPSTGRLGRILAARSWLEQPAGGAEVPAEVTALTGITTDMVAGQRIDDAAVLDL
LAASNLVVSHNASFDRPKLEARLPAFAAKPWACTAAEIDWKAEGIGSAKLDYVAFRMGFI
FAGAHRGEVDCLAGVEVLSRTLAVTGTLAMASLLARARTPTSRVWAIGSPFDAKDALKRR
GYRWNDGSIPGSARTWFRDLQEDGADAELEWLRANAGCTGVPVRLTARDRHAARAMLIP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggccgaaatggccgccgccctggaggacaccggccgctaccgcgtcttcgac
gtctaccggcagacggacgggtacggcgacctgccgccggatgcgacggtctgccggctg
ctctacatcgacacggagacgaccggcctcgagcacgacgccgagatcatcgaactggcg
gccgtgcaggtggaatacgacccgtcgaccggcaggctcggcaggatcctggccgcccgt
tcgtggctggagcagccggccggcggcgccgaagtgccggcggaagtgaccgcgctgacc
ggcatcaccacggacatggtcgccgggcagcggatcgacgacgcggccgtgctggacctg
ctggccgcgtcgaacctggtggtctcgcacaacgcgtccttcgaccgcccgaagctcgag
gcgcggctgccggctttcgcggcgaagccctgggcctgcacggcggccgagatcgactgg
aaggccgaaggcatcggctcggcgaaactcgattatgtcgccttccgcatgggcttcatc
ttcgccggggcccaccgcggcgaggtcgactgcctggcgggcgtcgaggttctgagccgg
acgctggcggtgacgggaacgctcgcgatggcgagcctgctggcgcgggcacggacgccg
acctcaagggtgtgggcgatcggcagcccgttcgacgccaaggatgcgctgaagcggcgc
ggataccggtggaacgacggatcgatcccgggcagcgccaggacatggttccgcgacctg
caggaggatggtgcggatgccgaactggagtggctgagagcgaatgccggctgcacaggc
gttccggtccggctgacggcgcgggaccgccatgccgcgagggcgatgctgatcccctga
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