Skermanella cutis: IGS68_01235
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Entry
IGS68_01235 CDS
T07020
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skt03021
]
IGS68_01235 (rpoH)
Transcription machinery [BR:
skt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IGS68_01235 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_11
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
QQP89932
LinkDB
All DBs
Position
263444..264343
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AA seq
299 aa
AA seq
DB search
MTLLNIAQAGGGMGRYLDEAKRFPMLNPGQERDLAIAWRERGDEEALRLLTGSHLRLVIK
IARGFAGYGLPASELIAEGNVGLMQAAQKFDPDRGFRFATYAIWWIRAAIQEYILHNWSM
VKMGTTAAQKKLFFNLRRLKGRMEELEQGDLSPATVTTIATELDVPESEVVEMNRRLSMG
DSSLNAAVGAEGDTDWLDLLSDERPTQEAVVAEADELALRRRLLDQALEKLNDRERQILM
ERRLADEPATLEVLGERYAVSRERIRQIEARAFEKLQKAVLNAAQALRKPAGQAMLAAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacattgctgaacatcgcgcaggccggcggcggcatgggccgttacctggacgaagcg
aaacgctttcccatgctgaatcccgggcaggagcgggacctggcgatcgcctggcgcgag
cgcggcgacgaggaggccctgcgcctgctgacgggcagccatctgcggctggtgatcaag
atcgcgcgcggcttcgcggggtacggcctgcccgcgtccgagctgatcgccgagggcaac
gtgggcctgatgcaggcggcccagaagttcgacccggaccgcggtttccggttcgccacc
tatgcgatctggtggatccgcgcggcgatccaggaatacatcctgcacaattggtccatg
gtcaagatgggcaccaccgccgcccagaagaagcttttcttcaacctgcgccgcctgaag
ggccggatggaggagctggagcagggcgacctgtcgccggccacggtgacaaccatcgcg
accgagctggacgtgcccgaatcggaagtggtcgagatgaaccgccggctgtccatgggc
gacagctcgctgaacgcggcagtgggggcggaaggcgataccgactggctggacctgctg
tcggacgagcggccgacccaggaggcggtggtcgcggaggccgacgagctggccctgcgg
cgacgcctgctggaccaggccctggagaagctgaacgaccgcgagcggcagatcctgatg
gagcgccggctggcggacgagccggccaccctggaggtgctgggcgagcgctacgccgtg
tcgcgcgagcggatccggcagatcgaggctcgggcgttcgagaagcttcagaaggcggtg
ctcaacgccgcccaggcccttcgcaaacccgcgggccaggcgatgctggccgcgggctga
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