Skermanella cutis: IGS68_06195
Help
Entry
IGS68_06195 CDS
T07020
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skt03000
]
IGS68_06195
Transcription factors [BR:
skt03000
]
Prokaryotic type
Helix-turn-helix
Other families
IGS68_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
HTH_30
GAF
HTH_23
HTH_7
PAS_4
AAA_2
Mg_chelatase
HTH_28
HTH_20
HTH_22
AAA_16
HTH_17
Phage_NinH
HTH_Tnp_1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QQP90814
UniProt:
A0ABX7B9J5
LinkDB
All DBs
Position
1337480..1339321
Genome browser
AA seq
613 aa
AA seq
DB search
MGSLSPAERLRQARIVLQDRGIASPDLLAPEIRQSWDRCLEAGLEPHRSPELLYAAGSVL
DEARERHELTRRLALAEMHNLYHQISGSNFMIALGDPAGMVLDTITDDTFRTTADAKNIR
AGGLWGELHQGTNALGLAAAMRAPVTVHGPEHFFTTYGGLTCNAAPIFGPNGEIAAVLDA
SSDCRSRQRHTMALVKMSVRQIENGLFREAYRDQLVLIFHTRAEYLRTLSAGLLAVDGEG
RVLAANRQAQFFLQGLPARPGHHFAELFRTGFHRFLDEGHRRDRVRLEDHEGSSYVVAID
NLRHACPIHARKDRTTPGAQAGFIAEDPAVRAAMRQVSGAAARGVPILIRGATGTGKELM
ARHAHAASGRSGAFVPVNCAALPESLVEAELFGHAEGAFTGARRGGARGLVVEADGGTLF
LDEIGDMPLPVQGSLLRLLDDWTVRPVGGGTRRKVDLQLVAATNVDLAEAVGAGRFRADL
FYRLDMMEVELPPLAGRSDFAAIARHLLRTIDPGCAITDEALEALAGRPWPGNIRELRGA
LTRLAIAVGERGLIDADHVGAARTAPAPSPSTLERAVIDRVVATWEQTGGNVAETARRLG
VTRNTVYKKLRNR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgctctcgcccgcggagcgcctgaggcaggcgcgcatcgtgctccaggaccgg
gggatcgcctcgccggacctgctcgccccggagatccggcaatcctgggaccgctgcctt
gaggccgggctcgagccgcaccgctcgccggagcttctctacgccgccggcagcgtgctg
gacgaggcgcgggagcggcacgagctgacccgacggctggcgctggccgagatgcacaac
ctctatcaccagatctccggctcgaatttcatgatcgcgttgggcgaccccgcgggcatg
gtgctggacaccatcacggacgataccttccgcaccacggccgacgccaagaatatccgg
gccggcgggctgtggggcgagcttcaccagggcaccaacgccctggggctggcggcggcc
atgcgggcgccggtgacggtccacggcccggagcatttcttcaccacctatggcggattg
acctgcaacgcggcgccgatcttcggcccgaatggcgagatcgccgccgtgctggacgcg
tcgagcgactgccggtcgcgccagcggcacaccatggcgctggtgaagatgtcggtccgc
cagatcgagaacgggctgttccgcgaggcgtaccgggaccaactcgtcctgatcttccac
accagggccgagtatctgcgtaccctgagcgccggcctgctggcggtggacggggagggc
agggtcctggcggccaaccggcaggcgcagttcttcctccaggggctgccggcccgaccc
gggcaccatttcgcggaactgttccggaccggcttccaccggttcctggacgaggggcat
cgccgggaccgtgtgcggctggaggaccacgagggcagcagctacgtcgtggcgatcgac
aacctgcgccatgcctgcccgatccatgcgcgcaaggaccggacgacgcccggcgcccag
gccggcttcatcgccgaggaccctgcggtcagggcggcgatgcggcaggtgtccggtgcc
gcggcgcggggggtgccgatcctgatccggggggccacggggactggcaaggaactgatg
gcccgccacgcccatgccgccagcggccgttccggcgccttcgtgccggtgaactgcgcg
gcgctgccggagagcctggtggaggccgaactgttcggccatgcggagggcgccttcacg
ggggcccgccggggcggcgcccgggggctggtcgtcgaggcggacgggggcaccctgttc
ctggacgagatcggcgacatgccgctgccggtgcagggaagcctgctgcggctgctcgat
gactggacggtccgtccggtcggcggcgggacccgcaggaaggtggatctccaactcgtc
gccgcgaccaacgtggatctggcggaggccgtgggcgcagggcgcttccgggccgacctg
ttctaccggctcgacatgatggaggtggaactgccgccgctggccgggcgatccgatttc
gccgccatcgcccgccacctgctgcggacgatcgatcccggctgcgccatcacggacgag
gcgttggaagcgctggccgggcgaccctggcccggcaacatccgcgaactgcgcggggcg
ctgacccggctcgccatcgcggtcggggagcggggcctgatcgatgccgaccatgtcggc
gctgcccggaccgctcccgcgccgtcaccctcgacgctggagcgggcggtgatcgaccgc
gtcgtggcgacctgggagcagaccggcggcaacgtcgccgaaaccgcccgccgcctgggc
gtcacccggaacaccgtctacaagaagctccggaatcgctga
DBGET
integrated database retrieval system
