Skermanella sp. TT6: IGS68_11575
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Entry
IGS68_11575 CDS
T07020
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00230
Purine metabolism
skt01100
Metabolic pathways
skt01120
Microbial metabolism in diverse environments
skt01232
Nucleotide metabolism
Module
skt_M00958
Adenine ribonucleotide degradation, AMP => Urate
skt_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
IGS68_11575 (xdhB)
Enzymes [BR:
skt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
IGS68_11575 (xdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
QQP91795
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All DBs
Position
2459953..2462295
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AA seq
780 aa
AA seq
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MPDSTEAGLVERISGAVHSDRRHDSAHKHVTGEAVYVDDIREPAGLLHVYLGLSDRPHAR
LVSLDLSAVKSAPGVVEVVTAADVPGVNDVSCMGRHDEPLFADDLIEYAGQPLFAVAAET
REQARRAARLAVATYEDLEPVLTLDRARERGTVVFPPMVLKRGESDAAIAGAPHRLEGRI
SIGGQDHFYLEGQIAMAVPGEDDEVLVHCSTQHPSEVQHIVAHVLNVPANAVAVEVRRMG
GAFGGKETQANLFAATAAVVARKTGRAAKLRPDRDDDMVITGKRHDFEVDYRVGFDDDGR
IRGVEFLFAARCGFAADLSGPVTDRALFHCDNTYFYEAVTAKSLPLKTNTVSNTAFRGFG
GPQGMVAAERVIEEVAYAVGKDPLEIRKLNFYGGEGRDLTPYHQTVEDNIAPEIVSALEE
RSDYRARRDAIRAHNARGGWLRKGIALTPVKFGISFTATQYNQAGALVHVYTDGTVHLNH
GGTEMGQGLYVKVAQVVAEEFQIDIEKVRVTATTTGKVPNTSATAASSGADLNGKAAQNA
AATIKERLIGFAVENWGVPREQVVFLPNRVRIGNQEIPFGDLVRTAYMARIQLSSTGFYK
TPEIHWDRAAGRGKPFYYFSYGAAAAEVTVDTLTGEYRVDRVDILHDVGHSLNPALDRGQ
VEGGFVQGMGWLTMEELWWDQRGHLRTHAPSTYKIPACSDRPRIFNVHLLENARNRKDTI
YRSKAVGEPPFMLGMSVLHAISDAVASVGDYATCPRIDPPATPEKVLTAIESLRAGKRQA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattcaacggaggcgggtctcgtcgagcgcatttccggtgccgtgcattccgac
cggcggcacgacagcgcgcacaagcacgtgaccggcgaagccgtctatgtcgacgatatc
cgggaacccgcggggctgctgcacgtctatctcggcctcagcgatcggccccatgcaagg
ctggtgtcgctggacctgtcggcggtgaaatcggcgccgggggtggtcgaggtcgtcacg
gcggcggacgtgccgggcgtcaacgacgtgagctgcatgggccggcatgacgagccgctg
ttcgccgacgacctgatcgagtatgccggccagcccctgttcgcggtggcggcggagacc
cgggagcaggcgcgccgggcggcgcggctcgcggtcgcgacctacgaggacctggagccg
gtgctgaccctggaccgggcgcgggagcgcggaaccgtggtgttcccgcccatggtcctg
aagcgcggcgagtcggatgcggcgatcgccggagcgccgcaccggctggaaggcaggatc
tcgatcggcggccaggaccatttctatctggagggccagatcgccatggccgtccccggc
gaggacgacgaggtactggtccattgctcgacccagcatcccagcgaggtccagcacatc
gtcgcccatgtgctgaacgtgccggccaacgccgtggcggtcgaggtccggcgcatgggc
ggggcgttcgggggcaaggagacgcaggcgaatctcttcgcggcgacggcagccgtggtc
gccaggaagacgggccgggcggcgaagcttcggccggaccgcgacgacgacatggtgatc
accggcaagcgccacgacttcgaggtggattaccgcgtcgggttcgacgatgacgggcgg
atccggggcgtcgagttcctgttcgccgcgcgctgcgggttcgccgccgacctgtccggg
ccggtgaccgaccgggcgctgttccactgcgacaacacctatttctacgaggcggtcacg
gcgaagtcgctgccgctgaagaccaacacggtgtccaacacggcattccgcgggttcggc
ggaccccaggggatggtcgcggcggaacgggtgatcgaggaggtcgcctatgccgtgggc
aaggacccgctggagatccgcaagctgaatttctacggcggcgaaggccgggacctgacg
ccctatcaccagaccgtggaggacaatatcgcgcctgagatcgtctcggcgctggaggag
cggtctgactaccgggcgcggcgcgacgcgatccgggcgcacaacgccaggggcggctgg
ctgcgaaaggggatcgcgctgacgccggtcaagttcggcatttccttcacggccacccag
tacaatcaggccggcgcgctggtccatgtctataccgacggcaccgtccacctgaaccac
ggcgggaccgagatggggcaggggctctacgtgaaggtcgcccaggtcgtcgccgaggag
ttccagatcgacatcgagaaggtccgcgtcacggcgaccacgaccggcaaggtgcccaac
acctcggccaccgcggcgtcgtcgggggccgacctgaacggcaaggccgctcagaatgcg
gcggcgacgatcaaggagcggctgatcggcttcgcggtcgagaactggggtgtgccccgg
gagcaggtggtgttcctgcccaaccgggtgcggatcggcaaccaggagatcccgttcggc
gacttggtgcggacggcctacatggcgcgcatccagctttcgtccaccggattctacaag
acgccggagatccactgggaccgggcggccggtcggggcaagccgttctattacttctcc
tacggtgctgcggcggccgaggtgaccgtcgatacgctgaccggggagtacagggtcgac
cgggtcgatatcctgcacgatgtggggcattcgctgaacccggcgctggaccgcggccag
gtcgagggcggtttcgtgcagggcatgggctggctgaccatggaggagctgtggtgggac
cagcgggggcatctgcggacccacgcgcccagcacatacaagatcccggcctgcagcgac
cggccgcgcatcttcaacgtccacctgctggagaacgcgcggaaccgaaaggacacgatc
taccgctccaaggcggtcggggagccgcccttcatgctgggcatgtcggtgctccacgcg
atctcggacgcggtggcgagcgtcggcgactacgcgacctgcccgaggatcgatccgccg
gccacgccggagaaggtgctgacggcgatcgagtccctgcgggcgggaaagcggcaggca
tga
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