Skermanella cutis: IGS68_13560
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Entry
IGS68_13560 CDS
T07020
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
skt
Skermanella cutis
Pathway
skt02020
Two-component system
skt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IGS68_13560
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IGS68_13560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
skt02035
]
IGS68_13560
Bacterial motility proteins [BR:
skt02035
]
Flagellar system
Chemotaxis proteins
MCPs
IGS68_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF948
DUF2713
TerB_C
AAA_13
Laminin_I
Motif
Other DBs
NCBI-ProteinID:
QQP92424
LinkDB
All DBs
Position
complement(2872048..2873874)
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AA seq
608 aa
AA seq
DB search
MEGARGALTQYALTETDGDLSAANQALEVLGSAIATLDAAALDADAALVGRIVKAAEAHD
AAARQSVAAVSERRIGVSALVKASTGLGTTTSAIVGTAVRDGKAEVTDLAAKLAEAGQAS
ALAATRYVSSRNPADAGIAIKEAERFSETLAGLAAATTDSRRLQRFAAALPAILDEYRKA
LDGVVSATDRFAAAGAERIRAAEALGTAIGQLRQASTDSQNSTFSDMTGAAEQARALGLA
VAGGALLIGVVMAFLIARSITRPIRSLSSIMQRLAGNDLSVQVDFTRRRDEIGGMARAVE
TFKANGLEVKRLQAEQEEIKRRSEAERKADLMRLADGFEANVKGVVDAVSSAATEMERSA
GAMSRTAESASHQAVIVAAASEQATTNVNTVAGAAEELSASIQEISRQMSTSLRITAQAV
QDAERTDALMRGLTDAAREIGQVIELINSIAGQTNLLALNATIEAARAGEAGKGFTVVAS
EVKALASQTERATGEIQAKVLEIQQATGNAAGAIQGIARTIGRINEISSSVAAAVEQQNA
ATGDISRNVQQAAAGTQQVSGNIVGVSQASSETGAAAGQVLDAAGSLALEAERLRGEVAR
FLADVRCA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggcccgtggggccctgacgcaatatgcgctgacggaaaccgacggagacctg
tcggccgcgaaccaggcgctggaggtactgggctccgccatcgcgacgctcgacgccgcg
gcgctggacgcggacgcggccctggtcggtcgcatcgtcaaggcggcggaagcccatgac
gccgcggcccggcagagcgtcgccgcggtgtcggaacggcgcatcggcgtctcggccctg
gtcaaggcttccaccggcctgggcaccaccacgtccgcgatcgtcggcacggcggtgcgg
gacggcaaggccgaggtcacggacctggcggcgaaactggccgaggcggggcaggcgagc
gccctggcggcgacgcgctatgtctcgtcgcgcaaccccgccgacgccgggatcgcgatc
aaggaggccgagcggttctccgagaccctggcagggttggcggcggcgacgaccgacagc
cgccggctccagcggttcgccgccgccctgccggcgatcctggacgaatatcgcaaggcg
ctcgacggcgtcgtctcggcgacggaccggttcgcggcggcgggtgccgagcggatccgc
gccgccgaggccctggggaccgccatcgggcagctgcgccaggccagcacggacagccag
aacagcaccttctccgacatgacgggtgctgcggagcaggcgcgggcgctggggctggcc
gtggcgggaggcgcgctgctgatcggggtcgtgatggctttcctgatcgcccgcagcatc
acccggccgatccggtcgctaagttcgatcatgcagcgactggcgggtaacgatctctcc
gtccaggtcgatttcacccggcggcgcgacgagatcggcgggatggcgcgggcggtcgag
accttcaaggccaacggcctggaggtgaagcggctgcaggcggagcaggaggagatcaag
cgccggagcgaagcggagcgcaaggccgacctgatgaggctggccgacgggttcgaggcg
aacgtcaagggcgtggtcgacgcggtgtcgtccgcagcgaccgagatggagcgcagcgcc
ggggccatgtcgcggacggcggagtcggcttcgcaccaggcggtgatcgtcgccgcggcc
tccgagcaggcgaccaccaacgtcaacacggtcgcgggggccgcggaggaactgtccgcc
tcgatccaggagatcagccggcagatgtccacctcgctgaggatcaccgcccaggcggtc
caggacgccgagcggaccgacgccctgatgcgcggcctgaccgacgcggcccgggagatc
gggcaggtgatcgagctgatcaactccatcgccgggcagaccaacctgctggccctgaac
gccaccatcgaggcggcgcgggccggggaggccggcaagggcttcacggtggtggccagc
gaggtcaaggcgctggcgtcccagaccgagcgcgcgactggggagatccaggccaaggtg
ctggagatccagcaggcgaccgggaacgcggcgggggccatccaggggatcgcgcggacg
atcggccggatcaacgagatctcctccagcgtggcggccgccgtggaacagcagaacgcg
gccaccggcgacatatcccgcaacgtccagcaggctgccgccgggacgcagcaggtgtcc
ggcaacatcgtcggagtctcccaggcttcgagcgagaccggggcggccgcggggcaggtg
ctcgatgcggcgggaagcctcgccctggaggcggagcggctgcgcggcgaggtcgcccgc
ttcctcgcggacgtccgctgcgcctga
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