Skermanella sp. TT6: IGS68_14545
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Entry
IGS68_14545 CDS
T07020
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skt03019
]
IGS68_14545 (rnc)
03009 Ribosome biogenesis [BR:
skt03009
]
IGS68_14545 (rnc)
03036 Chromosome and associated proteins [BR:
skt03036
]
IGS68_14545 (rnc)
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IGS68_14545 (rnc)
Messenger RNA biogenesis [BR:
skt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IGS68_14545 (rnc)
Ribosome biogenesis [BR:
skt03009
]
Eukaryotic type
90S particles
RNase
IGS68_14545 (rnc)
Prokaryotic type
rRNA processing factors
IGS68_14545 (rnc)
Chromosome and associated proteins [BR:
skt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IGS68_14545 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QQP87341
LinkDB
All DBs
Position
complement(3078753..3079514)
Genome browser
AA seq
253 aa
AA seq
DB search
MSAIGTEQQNGHPGPADLAELADALGHRFRQPDLLVDAVTHPSVSGMERLGRRPGRVAVP
GLAYERLEFLGDRVLGLVIANWLLERFPGEREGALARRLASLVRWETLSQVAAQLDLGRY
LRLSTGEAESGGRTNGTILADCCEAVIGALYLDGGLPVAETFIRSRWADQIDRAASPPQD
VKTALQEWAQGRGKPLPVYETMGQTGPDHSPQFEVRVHLQGFEPVVAQGNSKRAAEKAAA
SEMLRRVGAPINE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccatcggcaccgagcaacagaacggccatcccggtccagccgacctggccgaa
ctcgcggatgccctcgggcaccggttcaggcagccagaccttctggtcgatgcggtgacc
catcccagcgtcagcgggatggaacgcctgggcaggcggccgggcagggtggccgtcccg
gggctggcttacgagcgcctggaattcctgggcgaccgggtccttggcttggtcatcgcc
aactggctgctggagcgattcccaggcgagcgcgagggcgcgctggcccgccgcctggcc
agcctcgtccgttgggagaccctgagccaggtagcggcccagctcgaccttggccgctac
ctgcggctctcgaccggcgaagcggagtccggtggccggaccaacgggacgatcctggcg
gattgctgcgaggcggtgatcggcgcgctctacctggacggcggccttcccgtcgcggag
accttcatccgcagccgatgggccgaccagatcgaccgggcggcatcgccgccgcaggac
gtcaagacggcgctccaggaatgggcgcaggggcgcggcaagcccttgcccgtgtatgaa
accatgggccagaccggcccggaccatagcccgcagttcgaggtcagggtgcatctgcag
ggcttcgagcccgtcgtcgcccagggcaattcgaagcgggcggcagagaaagccgcggca
agcgagatgcttcgccgcgtcggagcaccgatcaatgagtga
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