Skermanella cutis: IGS68_14760
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Entry
IGS68_14760 CDS
T07020
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skt03032
]
IGS68_14760
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_14760
Enzymes [BR:
skt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IGS68_14760
DNA replication proteins [BR:
skt03032
]
Prokaryotic type
DNA Topoisomerases
IGS68_14760
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IGS68_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QQP87381
LinkDB
All DBs
Position
3127274..3128371
Genome browser
AA seq
365 aa
AA seq
DB search
MQDGAIRVNEEEGTIVDPPAAAEQAGLVYVSDEEPGIRRRKSGKGFSYRKPDGGALKDKA
DLDRIKSLAIPPAYTDVWICPDPNGHIQATGRDDRGRKQYRYHPRWREVRDSTKYERMLE
FGRALPAIRERIAADMGKRGLPREKVLATVVHLLENTLIRVGNATYSKENKSFGLTTLLD
RHVEVDGGKLRFEFKGKSGKVWNLQVKDRRIARIVKSCQDVPGQHLFQYLDDDGTRHGVT
SQDVNDYLREISGKDFSAKDFRTWAGTVLAALALAEFESFDTKAAAKRNLRAAIERVSAR
LGNTPAICRKCYIHPQVLDCYLEGDLVTQLKDQVEDDLRSGLDALKPEEAAVLAFLHRRL
EREAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggcgcgatccgcgtgaacgaagaagaaggcactatcgtcgacccgcccgcc
gccgccgaacaggccgggctggtctatgtctcggacgaggaaccgggtatccggcggcgg
aagtcgggcaaggggttcagctaccggaagcccgacggcggcgccctgaaggacaaggcg
gacctggaccggatcaagtcgctggcgatcccgcccgcctatacggacgtctggatctgc
cccgaccctaacggacatatccaggcgaccggccgcgacgaccggggccgcaagcagtac
cgctaccatccccgatggcgggaagtgcgcgacagcaccaagtacgagcgcatgctggag
ttcggccgggcgcttcccgcgatccgggagcgcatagcggccgatatgggcaagcgcgga
ctgccgcgcgagaaggtattggcgaccgtcgtccacctgctggaaaacaccctgatccgg
gtcggcaacgcgacatattcgaaggagaacaagagcttcggcctgactaccctgctggac
cgccacgtggaggtggacggcggcaagctgcggttcgagttcaagggcaagagcggcaag
gtctggaacctgcaggtcaaggaccgccggatcgcccgcatcgtaaagtcctgccaggac
gtgccgggccagcacctgttccagtatctcgacgacgacggcacccggcacggtgtcacc
tcgcaggacgtgaacgactatctgagggagatcagcgggaaggatttctccgccaaggat
ttccggacctgggccggcaccgtgctggcggcgctggcgctggccgagttcgaaagcttc
gacacgaaggccgccgccaagcggaacctgcgcgccgccatcgaacgggtttccgcccgg
ctcggcaacacgccggcgatctgccggaaatgctacatccatccccaggtgctcgactgc
tatctcgaaggggatctggtcacccagttgaaggatcaggtagaagacgaccttcgctcc
ggcctcgacgccctcaagccggaggaagcggccgtgctggcctttctccatcgccgcctc
gagcgcgaagccgcctga
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