Skermanella cutis: IGS68_16070
Help
Entry
IGS68_16070 CDS
T07020
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
skt
Skermanella cutis
Pathway
skt03410
Base excision repair
skt03430
Mismatch repair
skt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IGS68_16070 (recJ)
03430 Mismatch repair
IGS68_16070 (recJ)
03440 Homologous recombination
IGS68_16070 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_16070 (recJ)
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IGS68_16070 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IGS68_16070 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IGS68_16070 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QQP87615
LinkDB
All DBs
Position
complement(3395297..3397084)
Genome browser
AA seq
595 aa
AA seq
DB search
MSSQQAFLNVSRSLGGRRWVARPSDERTALALAQSHGLPELVGRVLSARGVDLPTADNFL
SPTLKAMLPDPSDLKDMDAAADRIARAIRSGERVAVFGDYDVDGATSSALLRRFFRAAGA
ELSVYIPDRISEGYGPNAPALLRLKDSGVSLVVTVDCGVTAFDPLAAAAGAGLDVVVVDH
HAAEPRLPRAVAVVNPNRVDEDSPHKTLAAVGVTFLLVVAVNRVLRDAGWWSNGRKQPDL
MGWLDIVALGTVCDVVPLVGLNRALVSQGLRVMARRANPGITALSDLCKLAEKPDAWHAG
YILGPRVNAGGRVGASDLGARLLSTDDPAEAAELARILDQHNTERRAIEATVVEEAMVQV
EAALEDLGGLVFAVGEGWHPGVIGIVAARLKERYNRAACVVALDKGIGKASGRSVRGVDL
GAAVIAARHAGLLIAGGGHRMAAGFTAAAERLPELKRFLSDRIAAQQEGGPLAPTLELDG
VLSVGGATPDLVGTLAKLGPFGTGNSEPRFALADARIAHASVVGENHVRCILTGGGGERL
KAIAFRALDSDLGKGLLKSGGAPLHVAGHLRPDNWQGRNEVQLMIEDAAPVWGGN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcaacaggccttcctgaacgtatcccgctcgctgggcggtcggcgctgggtc
gcccggccgtccgacgagcggaccgccctggcgctcgcccagagccacggcctgccggaa
ctggtcggccgcgtgctctcggcgcgcggcgtcgacctgccgacggcggacaatttcctg
tcgccgacgctcaaggcgatgctgcccgaccccagcgacctgaaggacatggacgcagcg
gccgaccggatcgcgcgggcgatccggtccggcgaacgggtggcggtgttcggcgactat
gacgtggacggcgccacctcctcggccctgctgcgccgtttcttccgggcggccggggcg
gagctgtccgtctatattccggaccggatctccgaaggctacggccccaacgcgccggcc
ctgctccggctgaaggactcgggcgtcagcctggttgtcacggtcgattgcggcgtgacc
gccttcgatccgctggccgccgccgccggggccgggctcgacgtcgtcgtggtcgaccac
cacgccgcggagccgcgcctgccccgggcggtcgcggtggtgaaccccaaccgggtggac
gaggactcgccgcacaagaccctggccgcggtcggcgtcaccttcctgctggtcgtggcg
gtcaaccgcgtgctgcgggatgccggctggtggtcgaacggccggaagcagccggacctg
atgggctggctcgacatcgtggccctgggcacggtgtgcgacgtggtcccgctggtcggc
ctcaaccgcgcccttgtcagccaggggctcagggtgatggcgcggcgggccaatccgggc
atcacggcgctgtccgacctgtgcaagctggcggagaagccggacgcctggcacgccggc
tatatcctggggccgcgggtgaacgccggcggccgggtgggcgcgtccgacctgggcgcc
cggctgctctcgaccgacgatccggccgaggccgctgagctggcgcgcatcctcgaccag
cacaacaccgagcgccgcgcgatcgaggccaccgtggtcgaggaagccatggtccaggtc
gaggcggcgctggaggacctgggcggcctggtcttcgcggtcggcgagggctggcacccc
ggggtgatcggcatcgtcgccgcccgcctgaaggagcggtacaaccgggcggcctgcgtc
gtggcgctggacaagggcattggcaaggcgtccggccggtcggtccgcggggtcgacctg
ggggcggcggtgatcgccgcgcgccatgccggcctgctgatcgccggcggcggccaccgg
atggcggccggtttcaccgcggcggccgagcggcttccggagctgaagcgattcctgtcc
gaccgcatcgccgcccagcaggagggcggaccgctcgccccgacgctggaactcgacggc
gtgctgtcggtgggaggggccacgcccgacctggtcggcacgctcgccaagttgggtccc
ttcggcaccggcaattccgagccccgcttcgcgctggccgacgcccggatcgcccatgcc
agcgtggtcggcgagaaccatgtccgctgcatcctgaccggcggagggggagagcgcctg
aaggccatcgcgttccgcgcgctcgacagcgaccttggcaagggcctgctgaagagcggc
ggcgcgccgctgcatgtcgccggccacctgcgccccgacaactggcagggccgcaacgag
gtccagctgatgatcgaggacgcggccccggtctggggagggaactga
DBGET
integrated database retrieval system
