Skermanella cutis: IGS68_17130
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Entry
IGS68_17130 CDS
T07020
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
skt
Skermanella cutis
Pathway
skt00900
Terpenoid backbone biosynthesis
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
IGS68_17130
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
skt01006
]
IGS68_17130
Enzymes [BR:
skt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
IGS68_17130
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
IGS68_17130
2.5.1.29 geranylgeranyl diphosphate synthase
IGS68_17130
Prenyltransferases [BR:
skt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
IGS68_17130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QQP87799
LinkDB
All DBs
Position
complement(3636096..3636965)
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AA seq
289 aa
AA seq
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MDVVMRIEQTLDGALSEAEGAGAPPGLAAAMRHAVFPGGARIRPRLCLAVARACGAEDFS
AAAATAASIELLHCASLVHDDLPCFDDAPVRRGKPSVHRAFGEPLAVLAGDALIVLAFET
LARHAAACPERLATLLLCVGRSVGMPFGIVAGQAWESEPRVDLARYHRAKTGALFAAATV
GGAAAAGVESAPWRCLGEKIGEAFQVADDIRDVAGDPDELGKPVGRDAALGRMSAARELG
IDGALDRLDLLIGEAAESIPRCPGAAELRALIRLEAQRFLPKELVRVAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgtcatgcggatcgagcagaccctggacggagccttgagcgaggcggaaggg
gcgggcgccccgcccgggctggcggcggcgatgcggcacgccgtctttcccggcggcgcc
cggatcaggccccggctgtgcctggcggtggcccgggcctgcggggcggaggacttctcg
gccgccgcggcgaccgcggcctcgatcgagcttctgcactgcgcgtcgctggtccatgac
gacctgccctgcttcgacgacgcgccggtccggcgcggcaagccttccgtccaccgcgcc
ttcggcgaacccctggcggtgctggccggcgacgccctgatcgtgctggcgttcgagacg
ctggcgcgccacgccgcggcctgtcccgagcggctggcgacgctgctgctctgcgtcggc
cgctcggtcggcatgccgttcggcatcgtggcggggcaggcgtgggagagcgagccgcgg
gtcgacctcgcccgctaccacagggccaagaccggcgcgctgtttgctgcggcgacggtc
ggcggcgcggcggcggcgggcgtcgagtcggcgccctggcgctgcctcggcgagaagatc
ggcgaggcgttccaggtcgcggacgatatccgcgatgtcgccggcgatcccgacgagctg
ggcaagccggtcgggcgcgacgccgccctcggccggatgagcgccgcgcgcgaactgggc
atcgacggcgccctcgaccgcctcgacctgctgatcggggaggccgccgagtcgatcccg
cgctgtcccggcgccgccgagcttcgggcgctgatccgtctggaggcccagcgcttcctg
cccaaggaactggtgagggttgcagcatga
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