Skermanella cutis: IGS68_17755
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Entry
IGS68_17755 CDS
T07020
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
skt
Skermanella cutis
Pathway
skt03420
Nucleotide excision repair
skt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IGS68_17755
03430 Mismatch repair
IGS68_17755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_17755
Enzymes [BR:
skt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IGS68_17755
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IGS68_17755
MMR (mismatch excision repair)
Other MMR factors
IGS68_17755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
Metallophos_C
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQP87910
LinkDB
All DBs
Position
complement(3772449..3774785)
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AA seq
778 aa
AA seq
DB search
MSDPFHYDDPLNDAVPAVSPATAPAAQRFTYFDGLNEVQREAVETLDGPVLVLAGAGTGK
TRVLTTRLAHLLMTRRASPFQVLAVTFTNKAAREMRERVGALIGTPTEGWWMGTFHALAA
RILRRHAELVGLKGNFTILDSDDQIRLVKQLLKAENIDDKKWPARAVLGVIERWKDRALT
PDKLKPQDGGDMAGGRVVQLYRTYQERLQSLNACDFGDLLLHNITLFQANPEVLAEYQQR
FRYLLVDEYQDTNVAQYLWLRLLAQKHKNICCVGDDDQSIYGWRGAEVGNILRFENDFPG
AKVIRLEQNYRSTGHILAAAAGVISNNQGRLGKTLWTRSDHGERVKVRALWDGEEEARWI
GEEIEALQRAKVPLSQIAVLVRAGFQTREFEERFITLGLPYRVVGGPRFYERQEIRDAMA
YLRIVVQPDDDLAFERIINVPKRGVGPATIQQLYQLARARGIPLTEATWQLVQTDELKPK
MRTTLRNLMTDFDRWRTLGASTPHTELAQMVLDESGYTDMWKVDKTPEAPGRLENLKELV
AAMGEFENLAGFMEHVSLVMDNAEASGTEMVSVMTLHGAKGLEFDYVFLPGWEDGLFPSQ
RSMDDTGIAGLEEERRLAYVGLTRARRRAHVSHAANRRMHGSWVTAIPSRFVGELPEQHI
ETDAAPGLSAAPAPTFGGAGGFGSSFGGFRDFGGGFGSRPQRQPPGPRTGPVIEGSAFEV
APRRRPDQPLKRGMRVFHQKFGYGTVKAVDGDKLEIDFEQAGTKKVLDSFVVPAEKAG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccattccactatgacgacccgctgaacgacgccgttcctgcggtctcaccg
gcgacggccccggccgcgcaacgctttacctacttcgacggcctgaacgaggttcagcgc
gaggcggtcgagacgctggacggccccgtgctggtcctggccggggccggcaccggcaag
acccgcgtgctgacgacccggctggcccacctgctgatgacccggcgggcgtcgccgttc
caggtgctggccgtgaccttcaccaacaaggccgcgcgcgagatgcgcgagcgggtcggc
gcgctgatcggcaccccgaccgagggatggtggatgggcaccttccacgcgctcgccgcc
cgcatcctgcgccggcacgccgagctggtggggctgaagggcaacttcaccatcctggac
agcgacgaccagatccggctggtcaagcagctcctcaaggccgagaacatcgacgacaag
aaatggccggcgcgcgccgtgctcggcgtgatagagcggtggaaggaccgggcgctgacg
ccggacaagctgaagccccaggatggcggcgacatggcggggggccgcgtggtccagctc
taccggacctaccaggaacggctgcagagcctgaacgcctgcgatttcggcgacctcctg
ctgcacaacatcaccctgttccaggcgaaccccgaggtgctggcggagtaccagcagcgt
ttccgctacctgctggtcgacgagtaccaggacaccaacgtcgcccaatatctctggttg
aggctgctggcccagaagcacaagaacatctgctgcgtcggcgacgacgatcaatcaatc
tatggttggagaggggcagaggtcggcaacatcctgaggttcgagaacgacttccccggc
gcgaaggtgatccggctggagcagaactaccgctccacgggccatatcctggccgcggcg
gccggcgtcatctcgaacaaccagggccgcctgggcaagacgctgtggacgcggtccgac
catggcgagcgggtcaaggtcagggcattgtgggacggcgaggaggaggctcgctggatc
ggcgaggagatcgaggcgcttcagcgcgccaaggtgccgctgagccagatcgcggtgctg
gtccgcgccggtttccagacccgcgagttcgaggagcgattcatcacgctgggcctaccg
taccgcgtcgtcggcgggccgcgcttctacgagcggcaggagatccgcgacgcgatggcc
tatctgcgcatcgtcgtccagccggacgacgacctggccttcgagcggatcatcaacgtg
cccaagcgcggcgtcggccccgcgaccatccagcagctctaccagctcgcccgcgcccgg
ggcatcccgctgaccgaggcgacctggcagctcgtccagaccgacgagctgaagcccaag
atgcggacgacgctgcgcaacctgatgaccgacttcgaccgctggcggaccctcggggcc
agcacgccgcacaccgaactggcccagatggtgctggacgagtcgggctataccgacatg
tggaaggtggacaagacgccggaagcgccggggcggctggagaacctgaaggaactggtc
gcggccatgggcgagttcgagaacctcgccgggttcatggagcatgtcagcctggtgatg
gacaatgccgaggccagcggcaccgagatggtcagcgtgatgaccctgcacggcgccaag
gggctggagttcgactatgtcttcctgcccggctgggaggacggcctgttccccagccag
cgctccatggacgacaccggcatcgccgggctggaggaggaacgcaggctggcctatgtc
gggctgacgcgcgcgcggcggcgcgcccatgtcagccatgccgccaaccggcggatgcac
ggctcctgggtcacggcgatcccgtcgcgcttcgtcggcgaactgcccgaacagcacatc
gagaccgacgcggctccgggcctgtccgcggctccggcgcccaccttcggcggagcgggc
gggttcgggagcagcttcggcggcttccgcgatttcggcggcggtttcggatcgaggccg
cagcggcagccacccggcccccgaacgggtccggtgatcgagggcagcgccttcgaggtg
gcgccccggaggcggccggaccagccgctgaagcgcggcatgcgggtgttccaccagaag
ttcggctatggcaccgtcaaggcggtcgacggcgacaagctggagatcgacttcgagcag
gccggtaccaagaaggtgctggacagcttcgtggtccccgccgagaaggccggctga
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