Skermanella cutis: IGS68_18345
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Entry
IGS68_18345 CDS
T07020
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skt03016
]
IGS68_18345 (rnd)
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IGS68_18345 (rnd)
Transfer RNA biogenesis [BR:
skt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IGS68_18345 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QQP88014
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All DBs
Position
3924656..3925816
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AA seq
386 aa
AA seq
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MTLISTTADLEALCERLKAAEYITVDTEFMREKTFWPKLCLVQIAGPDEAAAVDPLADGI
DLAPLYRLMGDPSVLKVFHAARQDVEIFHNLAGEIPKPLFDTQVAAMVCGFGDSVGYETL
IAKLAGARVDKSSRFTDWSARPLTERQLTYALSDVTHLRPAYEKLKRRLVRTDRASWLDE
EMAVLTDPATYRVEPDDAWKRLKVRTDKPRFLAILKELAAWREREAQRKDIPRSRVLRDE
ALLEIASHAPRSVDDLARTRGLGRSVAEGRWGTELLAAVERGVSMPVGECPTGEPRPELP
PGLAPIVELLRVLLKMRCEDEQVAAKLVASSSDLEAIAADDEAPVPALKGWRRELFGDLA
LKLKHGRVALAVEGKRVRLVPLDESR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatttcgaccacagccgatctggaggcgttgtgcgaacgtctgaaggcggcg
gaatacatcaccgtcgataccgaattcatgcgggagaagacgttctggcccaagctgtgc
ctggtccagatcgccggaccggatgaggccgccgcggtcgacccgctggcggacggcatc
gacctggcgccgctctaccgcctgatgggcgatccgtcggtgctcaaggtgttccatgcc
gcgcgccaggacgtggagatcttccacaatctcgcgggcgagattcccaagccgctgttc
gacacccaggtcgccgccatggtctgcggcttcggcgacagcgtcggctacgagacgctg
atcgccaagctggccggcgcgcgggtggacaagtcgtcgcgcttcaccgactggtcggcc
cgtccgctgaccgagcggcagctgacctacgccttgtccgacgtgacccatctccgcccg
gcctacgagaagctgaagcgccggctggtccgaaccgaccgggcgagctggctggacgag
gaaatggccgtgctgaccgacccggccacctaccgggtcgagccggacgacgcctggaag
cggctcaaggtccgcaccgacaagccgcgcttcctcgccatcctcaaggaactggcggct
tggcgggaacgcgaggcccagcgcaaggacatcccgcgctcccgcgtgctgcgggacgag
gccctgctggaaatcgcctcccacgcgcccaggtcggtggacgacctcgcccgaacgcgg
ggcctggggcgcagcgtcgccgagggccgctggggcaccgaactgctggcggcggtggaa
cgcggcgtttccatgccggtcggcgaatgcccgaccggcgagccccggccggaactgccg
ccgggcttggcgccgatcgtcgagctgctgcgcgtcctgctgaagatgcggtgcgaggac
gagcaggtagcagccaagctggtcgccagctcgtccgacctggaagcgatcgcggcggac
gacgaggcgccggttcccgccctgaaggggtggcgtcgggagctgttcggcgatctggcg
ctgaagctgaagcacggccgcgtcgccctggcggtcgagggcaagcgggtcaggctggtt
ccgctcgacgaaagccggtag
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integrated database retrieval system
