Skermanella cutis: IGS68_18820
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Entry
IGS68_18820 CDS
T07020
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
skt
Skermanella cutis
Pathway
skt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IGS68_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_18820
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IGS68_18820
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IGS68_18820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
HHH_2
NAT10_TcmA_helicase
NTPase_1
AAA_16
AAA_22
nSTAND3
TraI_hel_assoc_N
NPHP3_N
RsgA_GTPase
MeaB
T2SSE
NACHT
AAA
TsaE
IstB_IS21
AAA_29
ATP_bind_1
AAA_28
DNA_pol_lambd_f
UvrD-helicase
CbiA
ABC_tran
MobB
NB-ARC
cobW
DUF6287
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QQP92517
UniProt:
A0ABX7BEA7
LinkDB
All DBs
Position
complement(4030735..4032954)
Genome browser
AA seq
739 aa
AA seq
DB search
MTAVQHRVEQPNRPASPAPDREVLAGLVERVTFHNAENGFCVLRIKARGHRDLITVVGHA
ASISAGEFVQASGAWHNDRTHGLQFKAGFLRTTMPTTVEGIEKYLGSGMIRGIGPVYAKK
LVRAFGADVFDVIEQQADRLREVAGIGPVRAKRIIAGWADQKVIREIMLFLHSHGVGTSR
SVRIFKTYGPDAIQLISENPYRLARDIRGIGFVTADAIAARLGIEKTAMVRARAGIAYAL
AEAMDEGHCGLPRGDLLALAEKLLDIPSPLIEEAIDLELADGTVVADRLDGFEAVFLAGL
YRSERNIATRLLGLAAGRPPWGAIDAATAIPWVEQRTGLTLAESQRAAVRLAVSSKLLVV
TGGPGVGKTTLVNSILKILAVKGLAIALAAPTGRAAKRLSESTGMEAKTIHRLLETDPAA
GGFKRTETNPLECELLVVDETSMVDVPLMNALLRAVPDGAAVLLVGDVDQLPSVGPGQVL
ADVINSGAVAVVRLTEVFRQAAESRIIVNAHRVNQGLMPEPHAGEGLTDFYFVDAADPED
GVRKVLHMVKHRIPERFGLDPVRDIQVLCPMNRGGLGARSLNIELQKVLNPPRDPRVERF
GWTFCEGDKVMQIENDYDKEVYNGDLGVVARIDPDDNSLLIEFDGREVAYDAGELDQVVL
AYATTIHKSQGSEYPAVILPVTTQHYAMLQRNLVYTGITRGKRLVVIVGQRKAMAIAVKG
QQSRRRWSKLRDWLSGGAG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtccagcacagggtggaacagcccaacaggccggcatcgcccgcgccggac
cgggaagtccttgccggtctggtcgagcgggttaccttccacaatgcggagaacggcttc
tgcgttctccgcatcaaggcgcgcggccatcgcgacctgatcaccgtcgtcggccatgcc
gcctcgatctcggcaggcgaattcgtccaggccagcggagcctggcacaacgaccgcacc
cacggcctccagttcaaggccgggttcctgcgcacgaccatgccgaccaccgtggaaggg
atcgagaagtatctcggctccggcatgatccgcggcatcggcccggtctatgccaagaag
ctggtgcgggccttcggcgcggacgtgttcgacgtgatcgagcagcaggcggaccggctg
cgcgaggtggccgggatcgggccggtgcgggccaagcggatcatcgccggctgggccgac
cagaaggtgatccgcgagatcatgctgttcctgcattcccacggcgtcggcacctcgcgg
tcggtccgcatcttcaagacctacgggccggacgcgatccagctcatctcggagaatccc
taccgcctcgcccgcgacatccgcggcatcggcttcgtcacggcggacgccatcgcggcc
cgcctcggcatcgagaagaccgccatggtcagggcgcgggccggcatcgcctatgccctg
gccgaggccatggacgaggggcattgcggcctgccgcgcggcgacctgctggcgctcgcg
gaaaagctgctcgacataccgtcgccgctgatcgaagaggccatcgacctcgaactggcc
gacggcaccgtcgtggcggaccggctcgacgggttcgaagccgtgttcctggcgggcctc
taccgctccgaacgcaacatcgccacccgcctgctgggcctcgccgccggacgcccgccc
tggggcgcgatcgacgccgccaccgcgattccctgggtcgagcagcgcaccggtctcacc
ttggcggagagccagcgcgccgcggtccggctcgcggtctcgtccaagctgctggtggtc
accggcggtcccggggtcggcaagaccacgctggtcaactcgatcctgaagatcctcgcg
gtcaagggcctcgccatagcgctcgccgcccccacgggccgggcggccaagcgcctgtcc
gagagcacggggatggaggccaagaccatccaccgcctgctggagaccgatcccgccgcc
ggcggcttcaagcggaccgaaacgaatccgctggagtgcgagctgctggtggtggacgag
acctccatggtcgacgtgcccctgatgaacgccctgctacgcgccgtgcccgacggcgcc
gccgtgctgctggtcggagacgtcgaccagcttccctccgtagggccggggcaggtgctg
gccgacgtgatcaattccggcgcggtagcggtggtccggctgaccgaggtgttccgccag
gccgccgagagccggatcatcgtcaacgcccatcgggtgaaccagggcctgatgccggag
ccccacgccggcgagggcctgaccgacttctatttcgtggacgccgccgacccggaggac
ggggtgcgcaaggtgctccacatggtcaagcaccgcatccccgaacgcttcggcctcgac
cccgtgcgcgacatccaggtgctgtgcccgatgaatcggggcgggctaggcgcccggtcg
ctcaacatcgagcttcagaaggtgctgaaccccccgcgcgatccccgcgtcgaacggttc
ggctggaccttctgcgagggcgacaaggtgatgcagatcgagaacgactacgacaaggag
gtctataacggcgacctgggcgtggtcgcccgcatcgatcccgacgacaactccctgctg
atcgagttcgacgggcgcgaggtcgcctacgacgccggcgagctggaccaagtggtgctg
gcctatgccaccacgatccacaaatcccagggatcggaatacccggcggtgatcctgccg
gtgaccacccagcactacgcgatgctccagcgcaaccttgtctataccggcatcacgcgc
ggcaagcgcctggtcgtcatcgtcggccagcggaaggccatggcgatcgccgtcaagggc
cagcaaagccgccgccgctggtcgaagctgcgggactggctgagcggcggcgcgggttaa
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