Skermanella cutis: IGS68_19850
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Entry
IGS68_19850 CDS
T07020
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skt03032
]
IGS68_19850
03036 Chromosome and associated proteins [BR:
skt03036
]
IGS68_19850
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_19850
DNA replication proteins [BR:
skt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IGS68_19850
Chromosome and associated proteins [BR:
skt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IGS68_19850
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IGS68_19850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_cement_2
HU-CCDC81_bac_1
DUF2267
HU-CCDC81_euk_1
VWA_3
DUF937
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QQP88285
LinkDB
All DBs
Position
4270232..4270507
Genome browser
AA seq
91 aa
AA seq
DB search
MNRAELVAAVADQTGQTKADAGKAVDAAFTVIAQALASGDEVKVPNFGSFSVAERAAREG
RNPQSGEKITIAASKQAKFSAAKGLKDALNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagccgaactcgtggccgccgtggccgaccagacggggcagacgaaagcggat
gccggcaaggcggtcgacgccgcgttcactgtcatcgcccaggctttggcgtccggcgac
gaggtcaaggttccgaacttcggcagcttcagcgtggctgaacgggccgctcgcgaaggg
cgcaatccccagagcggcgagaagatcaccatcgctgcgtcgaagcaggcgaagttttcg
gcggccaagggcctgaaggacgccctgaacggctga
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integrated database retrieval system
