Skermanella cutis: IGS68_19985
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Entry
IGS68_19985 CDS
T07020
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
skt
Skermanella cutis
Pathway
skt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IGS68_19985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skt03021
]
IGS68_19985
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_19985
Enzymes [BR:
skt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IGS68_19985
Transcription machinery [BR:
skt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IGS68_19985
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IGS68_19985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
QQP88311
LinkDB
All DBs
Position
complement(4296346..4297362)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPNKLDIQPGDDPQRVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
SIQIEGVLHEFSSIPGVREDVTDIVLNIKTMGLRLHGDGPKRMRLRADGPGEVTAGMIET
GPDIEVMDPDLVICTLDNGARLVMELTVESGKGYVPASQNRPEDAPIGLIPVDALFAPIR
KVSYKVDNTRVGQVTDYDRLSMQVETNGAVSPEDAVALAARILQDQLQLFINFEEPTHAV
AEERGEEPPFNKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLSQMGLHLGMEIPNWPPENIEELAKRLEEPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaattggcaggagctgatcaagccgaacaagctcgacatccagccgggc
gacgatccgcagcgggtcgcgaccgtggtcgccgagccgctcgagcggggcttcggcctc
acgctcggcaacgcgctccgtcgcgtcctgctgtcctccctccagggtgcggccgtcacc
tcgatccagatcgagggcgtgctgcatgaattctcgtcgatccccggcgtgcgcgaggat
gtcacggacatcgtcctgaacatcaagaccatgggcctgcgcctgcacggcgacggaccc
aagcggatgcgcctgcgcgccgacggccccggcgaagtcaccgccggcatgatcgagacc
ggccccgacatcgaggtgatggatcccgacctggtgatctgcaccctcgacaacggcgcc
cggctggtcatggagctgacggtcgagagcggcaagggctatgtcccggccagccagaac
cgtccggaagacgcgccgatcggcctgatcccggtggacgcgctgttcgcgccgatccgc
aaggtgtcgtacaaggtcgacaacacccgcgtcggccaagtcacggactacgaccgcctg
tcgatgcaggtggagaccaacggcgcggtgtccccggaagacgcggtggctctcgccgcc
cgcatcctccaggaccagctccagctcttcatcaacttcgaggagccgacccacgcggtc
gccgaggagcgcggcgaggagccgccgttcaacaagaacctgctgcgcaaggtggacgag
ctggaactgtcggtccggtccgccaactgcctgaagaacgacaacatcgtctatatcggc
gacctggtgcagaagacggaggcggagatgctccgcacgccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtcctgtcccagatgggtctgcacctgggcatggaaatcccg
aactggccgcccgagaacatcgaagagctggccaagcgtctcgaagagccgtactaa
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