KEGG   Skermanella cutis: IGS68_20145
Entry
IGS68_20145       CDS       T07020                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
skt  Skermanella cutis
Brite
KEGG Orthology (KO) [BR:skt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:skt03021]
    IGS68_20145 (rpoH)
Transcription machinery [BR:skt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IGS68_20145 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11
Other DBs
NCBI-ProteinID: QQP88341
LinkDB
Position
4316702..4317595
AA seq 297 aa
MSWRFVLSIHTDDTLTPFIEESRRFKMLTAEEEIDLGRRWRDEGDRRAMRLLVGSHLRLV
IKMARNFAGYGLPVADLIAEGNVGLMQAVEKFDPERGFRFNTYAMWWIRAAMQGYVLHNW
SMVKLGTTAAQKKLFFNLRRLKREMQELESGDLSAETVTSIATKLQVPEAEVVDMNRRLA
AADSSLNAVTAIDGEMEWQDLLVDQRPDQESIVADADELASRRRLLALGMEKLNDRERRI
LVERRMKDEPTTLEELSREYAVSRERVRQIEMRAFEKLQKAMLTAAPAALDRLAAAA
NT seq 894 nt   +upstreamnt  +downstreamnt
gtgtcttggaggttcgttttgagcattcataccgacgacaccctgaccccgttcatcgag
gaatcccgtcgcttcaagatgctgacggccgaggaggaaatcgatctgggccgccgatgg
cgcgacgagggcgaccggcgcgccatgcgccttctggtcggcagccacctgcgcctggtc
atcaagatggcccgtaatttcgccggctacggcctgccggtcgccgacctgatcgcggag
ggcaatgtcggcctgatgcaggcggtcgagaagttcgatccggaacgcgggttccgattc
aacacctatgccatgtggtggatcagggccgccatgcagggctatgtcctgcataactgg
tccatggtcaagctgggcaccacggcggcccagaagaagctgttcttcaacctgcgccgc
ctgaagcgcgagatgcaggaactggagtccggcgacctttcggcggagacggtcacctcg
atcgcgacgaagctgcaggtcccggaggcggaggtggtcgacatgaaccggcggctggcc
gccgcggacagttccctgaacgcggtgacggcgatcgacggcgagatggaatggcaggac
ctgctggtcgaccagcggcccgatcaggaaagcatcgtcgccgatgcggatgaactggcg
tcgcgtcggcgcctgctggcgctcggcatggaaaagctgaacgaccgcgaacgccgcatc
ctggtcgagcgccgcatgaaggacgagccgaccacgctcgaggagctcagccgcgaatac
gccgtttcccgcgagcgtgtcaggcagatcgagatgcgggctttcgaaaagctgcagaag
gccatgctgactgccgccccggccgcactcgaccggctggcggcggcggcctga

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