Skermanella cutis: IGS68_20145
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Entry
IGS68_20145 CDS
T07020
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skt03021
]
IGS68_20145 (rpoH)
Transcription machinery [BR:
skt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IGS68_20145 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QQP88341
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Position
4316702..4317595
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AA seq
297 aa
AA seq
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MSWRFVLSIHTDDTLTPFIEESRRFKMLTAEEEIDLGRRWRDEGDRRAMRLLVGSHLRLV
IKMARNFAGYGLPVADLIAEGNVGLMQAVEKFDPERGFRFNTYAMWWIRAAMQGYVLHNW
SMVKLGTTAAQKKLFFNLRRLKREMQELESGDLSAETVTSIATKLQVPEAEVVDMNRRLA
AADSSLNAVTAIDGEMEWQDLLVDQRPDQESIVADADELASRRRLLALGMEKLNDRERRI
LVERRMKDEPTTLEELSREYAVSRERVRQIEMRAFEKLQKAMLTAAPAALDRLAAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttggaggttcgttttgagcattcataccgacgacaccctgaccccgttcatcgag
gaatcccgtcgcttcaagatgctgacggccgaggaggaaatcgatctgggccgccgatgg
cgcgacgagggcgaccggcgcgccatgcgccttctggtcggcagccacctgcgcctggtc
atcaagatggcccgtaatttcgccggctacggcctgccggtcgccgacctgatcgcggag
ggcaatgtcggcctgatgcaggcggtcgagaagttcgatccggaacgcgggttccgattc
aacacctatgccatgtggtggatcagggccgccatgcagggctatgtcctgcataactgg
tccatggtcaagctgggcaccacggcggcccagaagaagctgttcttcaacctgcgccgc
ctgaagcgcgagatgcaggaactggagtccggcgacctttcggcggagacggtcacctcg
atcgcgacgaagctgcaggtcccggaggcggaggtggtcgacatgaaccggcggctggcc
gccgcggacagttccctgaacgcggtgacggcgatcgacggcgagatggaatggcaggac
ctgctggtcgaccagcggcccgatcaggaaagcatcgtcgccgatgcggatgaactggcg
tcgcgtcggcgcctgctggcgctcggcatggaaaagctgaacgaccgcgaacgccgcatc
ctggtcgagcgccgcatgaaggacgagccgaccacgctcgaggagctcagccgcgaatac
gccgtttcccgcgagcgtgtcaggcagatcgagatgcgggctttcgaaaagctgcagaag
gccatgctgactgccgccccggccgcactcgaccggctggcggcggcggcctga
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