Skermanella cutis: IGS68_20970
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Entry
IGS68_20970 CDS
T07020
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
skt
Skermanella cutis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skt03016
]
IGS68_20970
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IGS68_20970
Transfer RNA biogenesis [BR:
skt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IGS68_20970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QQP88486
LinkDB
All DBs
Position
complement(4497105..4497716)
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AA seq
203 aa
AA seq
DB search
MPIELYDGDLPDDYDFGPSVAIDTETMGLNPVRDRLCLVQLSAGDGNCHMVQFRQGRYDA
PNLKRLLTDPAVTKLFHFARFDIAVLQAYLGVVCEPVYCTKIASRLVRTFTDRHGLKDLC
KDLLGVELSKQQQSSDWGAADLTPDQLRYAASDVLHLHELRRRLDAMLEREGRTGLADEC
FRFLPTRAALDLGGWADQDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatagagctttacgacggcgatctccccgacgactacgatttcggccccagcgtc
gccatcgataccgaaaccatggggttgaaccccgtccgggaccgcctgtgcctggtccag
ctctcggccggcgacggcaactgccacatggtgcagttccgccagggtcgatatgacgcg
cccaacctgaagcggctgctgaccgaccccgccgtcaccaagctgtttcacttcgcccgg
tttgacatcgccgtcctgcaagcctacctgggagtcgtgtgcgagccggtctattgcacc
aagatcgcttccaggctggtgcgcaccttcaccgatcgccacggattgaaggacttatgc
aaggacctgctgggcgtggaactgtcgaagcagcagcaatcctcggactggggtgccgcc
gacctgacgcccgatcagctgagatacgccgcctccgacgtgcttcacctgcacgaactc
cgccgcaggctggacgccatgctggagcgcgaggggcgcaccggcttggcggacgaatgc
ttccggttcctgccgacccgcgcggcgctggatctcggcggctgggcggaccaggacatc
ttcgcccactga
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