Skermanella cutis: IGS68_23055
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Entry
IGS68_23055 CDS
T07020
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
skt
Skermanella cutis
Pathway
skt02020
Two-component system
skt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IGS68_23055
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IGS68_23055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
skt02022
]
IGS68_23055
02035 Bacterial motility proteins [BR:
skt02035
]
IGS68_23055
Two-component system [BR:
skt02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
IGS68_23055
Bacterial motility proteins [BR:
skt02035
]
Flagellar system
Flagellar assembly proteins
Others
IGS68_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_3
AAA
Response_reg
AAA_16
AAA_19
HTH_50
MCM
ATPase
AAA_30
TadZ_N
HTH_28
HTH_23
AAA_2
nSTAND3
HTH_Tnp_ISL3
AAA_7
AAA_22
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QQP88859
LinkDB
All DBs
Position
4947563..4949041
Genome browser
AA seq
492 aa
AA seq
DB search
MRLLIVGTLEGYITAAGRIAHERGAKVAYTDGIDKAMNALRGGQGADLVMIDVKFDIARL
IDALKLERITVPVIACGIGTDAQAAVRAIRAGAQEYIPLPPDAELIAAVLEAVVQESHAI
VSRDPAMGSVLRMADQIAPSDASVLITGENGTGKELMARYIHRKSRRADKVFVAVNCAAI
PENLLESELFGHEKGAFTGALARRVGKFEEANGGTLLLDEISEMDIRLQAKLLRAIQERE
IDRVGGSHPVKVDIRVLATSNRRLEEEARAGRFREDLYFRLNVVNLRLPPLRDRPADIVA
LAAHFAKKYAEQNGMPEKQPTPAALDVLKSHHWRGNVRELENTMHRAVLLSRGKDIDTDA
ILLTDPAPAPAPAPSPAPIHAPAEAAPAALAAARAAAGYAAYGGGRIMAPPPASPPPAAS
TLPGSLTGLVGRTVADVERDLIIDTLHHCLGNRTHAATILGISIRTLRNKLKQYSEEGVA
VPPPGDMERASL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgctgatcgtcggcacgctggaaggctacatcaccgcggcgggcaggatcgcc
cacgagcggggcgccaaggtcgcctacacggacggcatcgacaaggccatgaacgcgttg
cgcggcggccagggcgccgatctggtgatgatagacgtcaagttcgacatagcgcgcctg
atcgacgcgctgaagctggaacgcatcacggttccggtcatcgcctgcggcatcggcacg
gacgcccaggcggcggtccgggccatccgggccggcgcccaggaatacatcccgctgccg
cccgacgcggagctgatcgccgccgtgctggaggcggtggtccaggaaagccacgcgatc
gtcagccgcgaccccgccatgggatcggtgctgcgcatggccgaccagatcgcgcccagc
gacgcctccgtcctgatcaccggcgagaacggcaccggcaaggagctgatggcccgctac
atccaccgcaagagccggcgggccgacaaggtcttcgtcgcggtcaactgcgccgcgatc
cccgagaacctgctggaatcggagctgttcggccacgagaagggagccttcaccggggcg
ctcgcgcgccgcgtcggcaagttcgaggaggccaacggcggcaccctgctgctggacgag
atcagcgagatggacatccggctgcaggccaagctgctgcgcgcgatccaggagcgggag
atcgaccgggtcggcggcagccaccccgtcaaggtggacatccgggtcctggcgacctcg
aaccgccgcctggaggaggaggcccgcgccggccgtttccgggaggacctttacttccgc
ctcaatgtggtcaacctgcgcctgccgccgctgcgcgaccgcccggcggacatcgtcgcc
ctggcggcccatttcgcgaagaagtacgcggagcagaacggcatgccggagaagcagccg
acccccgcggcgctcgacgtgctgaagtcccaccactggcgcggcaacgtgcgcgagctg
gagaacaccatgcaccgggcggtgctgctctcccgcgggaaggacatcgacaccgacgcg
atcctcctgacggaccccgccccggcgcccgcccccgctccgtccccggctccgatccac
gccccggcggaggccgcgccggccgcactggcggccgcccgcgcggcggccggctatgcc
gcctatggcggcggccggatcatggcgccgcccccggccagtccgccgccggccgcgtcc
acgctccccggcagcctgaccggcctggtcggccggaccgtcgccgacgtcgagcgcgac
ctgatcatcgacacgcttcaccactgcctgggcaaccgcacccatgctgcgacgatcctc
ggcatctcgatccgcacgctgcgcaacaagctgaagcagtacagcgaggaaggcgttgcc
gtcccgccgccgggcgacatggaaagggcaagcctgtga
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