Skermanella sp. TT6: IGS68_23180
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Entry
IGS68_23180 CDS
T07020
Name
(GenBank) ABC transporter ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
skt
Skermanella sp. TT6
Pathway
skt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IGS68_23180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_23180
Transporters [BR:
skt02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
IGS68_23180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_29
AAA_22
RsgA_GTPase
SMC_N
AAA_27
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QQP88883
LinkDB
All DBs
Position
4974128..4975660
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AA seq
510 aa
AA seq
DB search
MSFLRTHRNGALGLEAVGMTKRFGGLAALDDVSLRVSAGSFHALLGENGAGKSTLVKCVM
GYYHADQGQIAVGETERSIANPRDAHALGVGMVYQHFTLVPGMTVAENLVLSRTHVPAVV
DWAAEIRALDAFMAGMPFRVPLDVPVSALAAGEKQKLEILKQLYLKNRFLILDEPTSVLT
PGEADEVLGLLRRMTREGRLTVLTITHKFREVMAYADEVTVLRRGRFAGTGKVADLTPAD
MAEMMIGAKEIPKGAARLSTDLGEPRLRIAGLKALGDGGLPAVEGLDLTVRAGEIVGIAG
VSGNGQRELVEVLAGQRPPAAGEIHVCGERYAATRAEMKRHRLCLLPEEPLRNACVARMS
VAENMSFRNFDDPPYARGGWWLNGGAMRGAARELIQLYKVKTPGPDAAIGTLSGGNVQRA
VLARELARDVRVLIVANPCFGLDFAAVADIRSQIMQARNRGAAVLLVSEDLDELFELADR
ICVMFDGHLVHETPTGQADIGVIGQHMAGH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctccgcacccatcgtaacggcgccctcggcctggaggccgtcggcatgacc
aagcgcttcggcgggctcgcagccctggacgacgtgtcgctgcgggtctccgccggcagc
ttccacgcgcttctgggcgagaacggggccggcaagagcacgctggtcaaatgcgtcatg
ggctattaccacgccgatcagggtcagatcgccgtcggcgagacggagcggtccatcgcc
aacccgcgcgatgcccacgcgctgggcgtcggcatggtctaccagcatttcaccctggtc
cccggcatgaccgtggcggagaacctggtgctgtcgcgcacgcacgtgccggccgtggtg
gactgggcggcggagatcagggcgctggacgctttcatggccgggatgccgttccgggtg
ccgctggacgtgccggtgtcggccctggcggcgggagagaagcagaagctggagatcctg
aagcagctctacctgaagaaccgcttcctgatcctggacgagccgacctccgtcctgacg
cccggcgaggccgacgaggtgctgggcctgctgcgccggatgacccgggagggccggctg
acggtcctgaccatcacccacaagttccgcgaggtgatggcctatgcggacgaggtgacg
gtgctgcgccggggccgcttcgccgggaccggcaaggtcgcggacctgacccccgccgac
atggcggagatgatgatcggcgccaaggagatccccaagggcgccgcccgcctgagcacc
gacctgggcgagccgcgcctccggatcgccgggctgaaggcgctgggcgacggcggcctc
cccgcggtcgagggcctggacctgacggtccgtgccggggagatcgtcggcatcgccggc
gtctcgggcaacggccagcgcgagctggtcgaggtgctggccggccagcgccctcccgcc
gccggggagatccatgtctgcggcgagcgctacgccgcgacccgcgccgagatgaagcgc
caccgcctgtgcctgctgccggaggagccgctgcgcaacgcctgcgtcgcccgcatgagc
gtggcggagaacatgtcgttccgcaacttcgacgacccgccctatgcccgcggcggctgg
tggctgaacggcggcgccatgcgcggggccgcgcgcgagctgatccagctctacaaggtc
aagacgcccggccccgacgccgcgatcggcaccctgtccggcggcaacgtccagcgcgcc
gtgctggcccgcgaactggcccgtgatgttcgggtgctgatcgtcgccaatccctgcttc
ggcctggacttcgccgcggtcgccgacatccgctcgcagatcatgcaggcccgcaaccgg
ggcgccgccgtgctgctggtcagcgaggacctggacgagctgttcgaactggccgaccgg
atctgcgtgatgttcgacgggcacctggtccacgagacgccgaccggacaggccgacatc
ggcgtgatcgggcagcacatggcggggcattga
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