Skermanella cutis: IGS68_23760
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Entry
IGS68_23760 CDS
T07020
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
skt
Skermanella cutis
Pathway
skt00260
Glycine, serine and threonine metabolism
skt00460
Cyanoamino acid metabolism
skt00630
Glyoxylate and dicarboxylate metabolism
skt00670
One carbon pool by folate
skt00680
Methane metabolism
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
skt01230
Biosynthesis of amino acids
skt01240
Biosynthesis of cofactors
skt04981
Folate transport and metabolism
Module
skt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_23760
09102 Energy metabolism
00680 Methane metabolism
IGS68_23760
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IGS68_23760
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IGS68_23760
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IGS68_23760
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IGS68_23760
Enzymes [BR:
skt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IGS68_23760
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QQP88989
UniProt:
A0ABX7B3S2
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All DBs
Position
complement(5094711..5096039)
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AA seq
442 aa
AA seq
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MSSLPQSFAPSSGFFGAALAESDPELASAIARELSRQQDQIELIASENIVSAAVLEAQGS
VLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKALFDCAFVNVQPHSGAQANQAVFMAL
LQPGDTILGMSLDAGGHLTHGAAANQSGKWFKAVQYGVRRDDARIDFDQVEALAREHKPK
LIIAGGSAYPRQIDFARFRRIADEVGAFFMVDMAHFAGLVAGGAYPTPLPHAHVVTTTTH
KTLRGPRGGMILSNDPDLGKKINSAVFPGLQGGPLMHVIAGKAAAFGEALRPDFKDYARS
VVENARALAARLIEGGVDIVSGGTDSHVVLVDLRPKNLTGKAAEASLEQAGMTCNKNGVP
FDPQKPMVTSGVRLGTPAATTRGFGVAEFTQVGAMISEVLDGLAASNSGDNAAVEAQVRE
RVRALCRRFPIYQGSPAHPERR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttccccaatccttcgcaccctcctccggcttcttcggcgccgccctggcc
gagagcgatcccgagctggcctcggccatcgcgcgcgaattgtcgcgccagcaggaccag
atcgagctgatcgcgtcggagaacatcgtctcggccgccgtgctggaggcgcagggctcg
gtcctgaccaacaagtacgcggagggctatcccggccgccgctactacggcggctgcgag
ttcgtcgacgtcgccgagcagctcgcgatcgaccgggccaaggccctgttcgactgcgcc
ttcgtcaacgtgcagccccactcgggcgcgcaggcgaaccaggcggtgttcatggcgctg
ctccagccgggcgacaccatcctcggcatgtcgctggacgccggcgggcacctgacccac
ggcgccgcggccaaccagtccggcaagtggttcaaggccgtccagtacggcgtgcgccgc
gacgacgcgcggatcgacttcgaccaggtcgaggcgctggcgcgcgagcacaagccgaag
ctgatcatcgcgggcggctcggcctatccccgccagatcgacttcgcccgcttccgccgg
atcgcggacgaggtcggcgccttcttcatggtcgacatggcccacttcgccggcctggtc
gccggcggcgcctacccgacgccgctgccccatgcccacgtcgtcaccacgaccacgcac
aagacgctgcgcggcccgcgcggcggcatgatcctgtccaacgacccggacctgggcaag
aagatcaattccgcggtcttcccgggtctgcagggcggcccgctgatgcatgtgatcgcc
ggcaaggcggcggccttcggggaggcgctgcggcccgacttcaaggactatgcccgctcg
gtggtggagaacgcccgcgcgctggcggcccgcctgatcgagggcggcgtcgacatcgtg
tccggcggcaccgacagccacgtggtgctggtcgacctgcggccgaagaacctgaccggc
aaggcggcggaggcgagcctggagcaggccggcatgacctgcaacaagaacggcgtgccg
ttcgacccgcagaagccgatggtcacctcgggcgtccggctcggcaccccggcggcgacc
acccggggcttcggcgtcgcggagttcacccaggtcggcgcgatgatctcggaagtgctc
gacggcctggccgccagcaattccggcgacaacgcggcggtggaggcccaggtgcgcgag
cgcgtccgcgccctgtgccggcggttcccgatctaccagggctcgccggcccatcctgag
aggcgttga
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